STRINGSTRING
POLR2C POLR2C POLR2K POLR2K ERCC3 ERCC3 POLR2D POLR2D MNAT1 MNAT1 U3JKD7_FICAL U3JKD7_FICAL RNGTT RNGTT POLR2E POLR2E U3KI68_FICAL U3KI68_FICAL U3KIB9_FICAL U3KIB9_FICAL U3KKE8_FICAL U3KKE8_FICAL U3K4J1_FICAL U3K4J1_FICAL POLR2J POLR2J DUSP11 DUSP11 U3JGX1_FICAL U3JGX1_FICAL GTF2H3 GTF2H3 U3K3S2_FICAL U3K3S2_FICAL U3K2C3_FICAL U3K2C3_FICAL POLR2H POLR2H GTF2F2 GTF2F2 U3JZU9_FICAL U3JZU9_FICAL GTF2H5 GTF2H5 LOC101820645 LOC101820645 POLR2L POLR2L GTF2H1 GTF2H1 U3K959_FICAL U3K959_FICAL CCNH CCNH CDK7 CDK7 SPAG7 SPAG7 POLR2I POLR2I POLR2B POLR2B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLR2CRNA polymerase II subunit C. (275 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (784 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
MNAT1MNAT1 component of CDK activating kinase. (240 aa)
U3JKD7_FICALUncharacterized protein. (630 aa)
RNGTTPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (600 aa)
POLR2ERNA polymerase II subunit E. (194 aa)
U3KI68_FICALUncharacterized protein. (327 aa)
U3KIB9_FICALUncharacterized protein. (494 aa)
U3KKE8_FICALKOW domain-containing protein. (54 aa)
U3K4J1_FICALUncharacterized protein. (254 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
DUSP11TYR_PHOSPHATASE_2 domain-containing protein. (156 aa)
U3JGX1_FICALUncharacterized protein. (882 aa)
GTF2H3General transcription factor IIH subunit 3. (307 aa)
U3K3S2_FICALUncharacterized protein. (527 aa)
U3K2C3_FICALUncharacterized protein. (334 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
GTF2F2Uncharacterized protein. (240 aa)
U3JZU9_FICALTYR_PHOSPHATASE_2 domain-containing protein. (252 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
LOC101820645General transcription factor IIH subunit. (402 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
GTF2H1General transcription factor IIH subunit 1. (616 aa)
U3K959_FICALUncharacterized protein. (439 aa)
CCNHCyclin H; Belongs to the cyclin family. (288 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
SPAG7Sperm associated antigen 7. (202 aa)
POLR2IRNA polymerase II subunit I. (63 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1172 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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