9 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ISL2	ISL LIM homeobox 2. (335 aa)
	ISL1	ISL LIM homeobox 1. (349 aa)
	SLIT1	Slit guidance ligand 1. (1444 aa)
	ZSWIM8	Zinc finger SWIM-type containing 8. (1822 aa)
	U3JMR6_FICAL	Peptidase S72 domain-containing protein. (694 aa)
	LHX9	LIM homeobox 9. (397 aa)
	LHX2	LIM homeobox 2. (428 aa)
	DAG1	Dystroglycan 1. (897 aa)
	SLIT2	Slit guidance ligand 2. (1508 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAG1	SLIT1	ENSFALP00000009394	ENSFALP00000008832	Dystroglycan 1.	Slit guidance ligand 1.	0.412
DAG1	SLIT2	ENSFALP00000009394	ENSFALP00000009618	Dystroglycan 1.	Slit guidance ligand 2.	0.528
SLIT1	DAG1	ENSFALP00000008832	ENSFALP00000009394	Slit guidance ligand 1.	Dystroglycan 1.	0.412
SLIT1	U3JMR6_FICAL	ENSFALP00000008832	ENSFALP00000004070	Slit guidance ligand 1.	Peptidase S72 domain-containing protein.	0.412
SLIT2	DAG1	ENSFALP00000009618	ENSFALP00000009394	Slit guidance ligand 2.	Dystroglycan 1.	0.528
SLIT2	U3JMR6_FICAL	ENSFALP00000009618	ENSFALP00000004070	Slit guidance ligand 2.	Peptidase S72 domain-containing protein.	0.528
U3JMR6_FICAL	SLIT1	ENSFALP00000004070	ENSFALP00000008832	Peptidase S72 domain-containing protein.	Slit guidance ligand 1.	0.412
U3JMR6_FICAL	SLIT2	ENSFALP00000004070	ENSFALP00000009618	Peptidase S72 domain-containing protein.	Slit guidance ligand 2.	0.528