72 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LMAN1	Lectin, mannose binding 1. (501 aa)
	LOC101809398	Uncharacterized protein. (191 aa)
	RHOG-2	Ras homolog family member G. (191 aa)
	RHOG	Uncharacterized protein. (191 aa)
	STBD1	Starch binding domain 1. (209 aa)
	CAV3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (151 aa)
	MAP3K21	Mitogen-activated protein kinase kinase kinase. (938 aa)
	KALRN	Kalirin RhoGEF kinase. (2667 aa)
	CDC42EP1	CDC42 effector protein 1. (429 aa)
	RBM39	RNA binding motif protein 39. (522 aa)
	U3KDD0_FICAL	Uncharacterized protein. (1039 aa)
	ARHGDIA	Rho GDP dissociation inhibitor alpha. (227 aa)
	LBR	Lamin B receptor. (638 aa)
	ARHGDIB	Rho GDP dissociation inhibitor beta. (195 aa)
	VRK2	VRK serine/threonine kinase 2. (350 aa)
	DOCK5	Dedicator of cytokinesis 5; Belongs to the DOCK family. (1832 aa)
	U3K927_FICAL	Uncharacterized protein; Belongs to the DOCK family. (1631 aa)
	DEPDC1B	DEP domain containing 1B. (529 aa)
	VAPB	VAMP associated protein B and C. (228 aa)
	ARHGAP35	Rho GTPase activating protein 35. (1063 aa)
	CDC42	Cell division cycle 42. (191 aa)
	CAV1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (178 aa)
	IQGAP2	IQ motif containing GTPase activating protein 2. (1659 aa)
	LEMD3	LEM domain containing 3. (729 aa)
	LETM1	Leucine zipper and EF-hand containing transmembrane protein 1. (734 aa)
	NDUFA5	NADH:ubiquinone oxidoreductase subunit A5. (116 aa)
	VAMP3	Vesicle associated membrane protein 3. (112 aa)
	DOCK2	Dedicator of cytokinesis 2; Belongs to the DOCK family. (1838 aa)
	ARHGEF16	Rho guanine nucleotide exchange factor 16. (721 aa)
	DOCK4	Dedicator of cytokinesis 4; Belongs to the DOCK family. (2008 aa)
	ARHGAP39	Rho GTPase activating protein 39. (1113 aa)
	DOCK3	Dedicator of cytokinesis 3; Belongs to the DOCK family. (2058 aa)
	PLD1	Phospholipase. (1075 aa)
	MCF2L2	MCF.2 cell line derived transforming sequence-like 2. (1272 aa)
	ANKLE2	Ankyrin repeat and LEM domain containing 2. (900 aa)
	PGRMC2	Progesterone receptor membrane component 2; Belongs to the cytochrome b5 family. (164 aa)
	DIAPH3	Diaphanous related formin 3. (1048 aa)
	RAB7A	RAB7A, member RAS oncogene family. (207 aa)
	KIAA0355	KIAA0355. (1045 aa)
	TRIO	Trio Rho guanine nucleotide exchange factor. (3105 aa)
	ARHGAP21	Rho GTPase activating protein 21. (2001 aa)
	MPP7	Membrane palmitoylated protein 7; Belongs to the MAGUK family. (589 aa)
	LETM2	Leucine zipper and EF-hand containing transmembrane protein 2. (464 aa)
	NDUFS3	NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family. (308 aa)
	LAMTOR1	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. (161 aa)
	ARHGAP1	Rho GTPase activating protein 1. (447 aa)
	VANGL1	Vang-like protein. (526 aa)
	MCAM	Melanoma cell adhesion molecule. (628 aa)
	DSG2	Desmoglein 2. (1111 aa)
	ARHGAP5	Rho GTPase activating protein 5. (1506 aa)
	ARHGEF26	Rho guanine nucleotide exchange factor 26. (579 aa)
	ARHGAP32	Rho GTPase activating protein 32. (1633 aa)
	MAP3K9	Mitogen-activated protein kinase kinase kinase. (1006 aa)
	ARHGEF5	Uncharacterized protein. (530 aa)
	MCF2L	MCF.2 cell line derived transforming sequence like. (1190 aa)
	HSPE1	Heat shock protein family E (Hsp10) member 1; Belongs to the GroES chaperonin family. (101 aa)
	OPHN1	Oligophrenin 1. (686 aa)
	ARHGDIG	Rho GDP dissociation inhibitor gamma. (205 aa)
	CYFIP1	Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1253 aa)
	ARFGAP3	ADP ribosylation factor GTPase activating protein 3. (500 aa)
	MCF2	MCF.2 cell line derived transforming sequence. (1080 aa)
	KTN1	Kinectin 1. (1354 aa)
	EPHA2	EPH receptor A2. (923 aa)
	PAK2	Non-specific serine/threonine protein kinase. (521 aa)
	VAV3	Vav guanine nucleotide exchange factor 3. (874 aa)
	ITSN1	Intersectin 1. (1704 aa)
	VAV2	Vav guanine nucleotide exchange factor 2. (892 aa)
	PLEKHG3	Uncharacterized protein. (369 aa)
	DOCK1	Dedicator of cytokinesis 1; Belongs to the DOCK family. (1871 aa)
	U3JEI1_FICAL	Uncharacterized protein. (848 aa)
	MPP3	Membrane palmitoylated protein 3; Belongs to the MAGUK family. (585 aa)
	YKT6	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family. (198 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKLE2	LOC101809398	ENSFALP00000008561	ENSFALP00000015784	Ankyrin repeat and LEM domain containing 2.	Uncharacterized protein.	0.451
ANKLE2	RBM39	ENSFALP00000008561	ENSFALP00000013040	Ankyrin repeat and LEM domain containing 2.	RNA binding motif protein 39.	0.427
ANKLE2	RHOG	ENSFALP00000008561	ENSFALP00000015367	Ankyrin repeat and LEM domain containing 2.	Uncharacterized protein.	0.451
ANKLE2	RHOG-2	ENSFALP00000008561	ENSFALP00000015377	Ankyrin repeat and LEM domain containing 2.	Ras homolog family member G.	0.451
ANKLE2	VRK2	ENSFALP00000008561	ENSFALP00000011672	Ankyrin repeat and LEM domain containing 2.	VRK serine/threonine kinase 2.	0.811
ARFGAP3	CDC42	ENSFALP00000004016	ENSFALP00000010798	ADP ribosylation factor GTPase activating protein 3.	Cell division cycle 42.	0.480
ARFGAP3	DOCK4	ENSFALP00000004016	ENSFALP00000009888	ADP ribosylation factor GTPase activating protein 3.	Dedicator of cytokinesis 4; Belongs to the DOCK family.	0.590
ARFGAP3	LOC101809398	ENSFALP00000004016	ENSFALP00000015784	ADP ribosylation factor GTPase activating protein 3.	Uncharacterized protein.	0.422
ARFGAP3	PLD1	ENSFALP00000004016	ENSFALP00000008838	ADP ribosylation factor GTPase activating protein 3.	Phospholipase.	0.419
ARFGAP3	RHOG	ENSFALP00000004016	ENSFALP00000015367	ADP ribosylation factor GTPase activating protein 3.	Uncharacterized protein.	0.422
ARFGAP3	RHOG-2	ENSFALP00000004016	ENSFALP00000015377	ADP ribosylation factor GTPase activating protein 3.	Ras homolog family member G.	0.422
ARFGAP3	YKT6	ENSFALP00000004016	ENSFALP00000000062	ADP ribosylation factor GTPase activating protein 3.	YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.	0.548
ARHGAP1	ARHGAP39	ENSFALP00000006535	ENSFALP00000009842	Rho GTPase activating protein 1.	Rho GTPase activating protein 39.	0.428
ARHGAP1	CDC42	ENSFALP00000006535	ENSFALP00000010798	Rho GTPase activating protein 1.	Cell division cycle 42.	0.956
ARHGAP1	DIAPH3	ENSFALP00000006535	ENSFALP00000008312	Rho GTPase activating protein 1.	Diaphanous related formin 3.	0.527
ARHGAP1	IQGAP2	ENSFALP00000006535	ENSFALP00000010465	Rho GTPase activating protein 1.	IQ motif containing GTPase activating protein 2.	0.491
ARHGAP1	LOC101809398	ENSFALP00000006535	ENSFALP00000015784	Rho GTPase activating protein 1.	Uncharacterized protein.	0.579
ARHGAP1	MPP3	ENSFALP00000006535	ENSFALP00000000861	Rho GTPase activating protein 1.	Membrane palmitoylated protein 3; Belongs to the MAGUK family.	0.441
ARHGAP1	MPP7	ENSFALP00000006535	ENSFALP00000007456	Rho GTPase activating protein 1.	Membrane palmitoylated protein 7; Belongs to the MAGUK family.	0.441
ARHGAP1	RHOG	ENSFALP00000006535	ENSFALP00000015367	Rho GTPase activating protein 1.	Uncharacterized protein.	0.579