19 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DEPDC4	DEP domain containing 4. (514 aa)
	RAPGEF4	Rap guanine nucleotide exchange factor 4. (1026 aa)
	DEPTOR	DEP domain containing MTOR interacting protein. (397 aa)
	RGS9	Regulator of G protein signaling 9. (485 aa)
	PIKFYVE	Phosphoinositide kinase, FYVE-type zinc finger containing. (2117 aa)
	RGS11	Regulator of G protein signaling 11. (456 aa)
	PLEK2	Pleckstrin 2. (355 aa)
	PREX2	Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2. (1606 aa)
	RGS6	Regulator of G protein signaling 6. (455 aa)
	DEPDC5	DEP domain-containing protein. (1592 aa)
	DVL3	Dishevelled segment polarity protein 3. (671 aa)
	DVL1	Dishevelled segment polarity protein 1. (687 aa)
	LOC101816087	Uncharacterized protein. (398 aa)
	DEPDC7	DEP domain containing 7. (519 aa)
	DEPDC1B	DEP domain containing 1B. (529 aa)
	PREX1	Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1. (1616 aa)
	DEPDC1	DEP domain containing 1. (799 aa)
	RGS7	Regulator of G protein signaling 7. (462 aa)
	PLEK	Pleckstrin. (353 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DEPTOR	LOC101816087	ENSFALP00000002482	ENSFALP00000010901	DEP domain containing MTOR interacting protein.	Uncharacterized protein.	0.901
DVL1	DVL3	ENSFALP00000009680	ENSFALP00000008289	Dishevelled segment polarity protein 1.	Dishevelled segment polarity protein 3.	0.933
DVL3	DVL1	ENSFALP00000008289	ENSFALP00000009680	Dishevelled segment polarity protein 3.	Dishevelled segment polarity protein 1.	0.933
LOC101816087	DEPTOR	ENSFALP00000010901	ENSFALP00000002482	Uncharacterized protein.	DEP domain containing MTOR interacting protein.	0.901
RGS11	RGS6	ENSFALP00000004302	ENSFALP00000005612	Regulator of G protein signaling 11.	Regulator of G protein signaling 6.	0.493
RGS11	RGS7	ENSFALP00000004302	ENSFALP00000013751	Regulator of G protein signaling 11.	Regulator of G protein signaling 7.	0.493
RGS6	RGS11	ENSFALP00000005612	ENSFALP00000004302	Regulator of G protein signaling 6.	Regulator of G protein signaling 11.	0.493
RGS6	RGS9	ENSFALP00000005612	ENSFALP00000002550	Regulator of G protein signaling 6.	Regulator of G protein signaling 9.	0.493
RGS7	RGS11	ENSFALP00000013751	ENSFALP00000004302	Regulator of G protein signaling 7.	Regulator of G protein signaling 11.	0.493
RGS7	RGS9	ENSFALP00000013751	ENSFALP00000002550	Regulator of G protein signaling 7.	Regulator of G protein signaling 9.	0.493
RGS9	RGS6	ENSFALP00000002550	ENSFALP00000005612	Regulator of G protein signaling 9.	Regulator of G protein signaling 6.	0.493
RGS9	RGS7	ENSFALP00000002550	ENSFALP00000013751	Regulator of G protein signaling 9.	Regulator of G protein signaling 7.	0.493