130 items (Ficedula albicollis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTPN3	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (970 aa)
	RHPN2	Rhophilin Rho GTPase binding protein 2. (683 aa)
	CNKSR1	Connector enhancer of kinase suppressor of Ras 1. (864 aa)
	MAGI3	Membrane associated guanylate kinase, WW and PDZ domain containing 3. (1016 aa)
	USH1C	USH1 protein network component harmonin. (567 aa)
	MPP3	Membrane palmitoylated protein 3; Belongs to the MAGUK family. (585 aa)
	SYNPO2	Synaptopodin 2. (1244 aa)
	LMO7	LIM domain 7. (1677 aa)
	RAPGEF6	Uncharacterized protein. (1659 aa)
	PDZPH1P	Uncharacterized protein. (457 aa)
	LRRC7	Leucine rich repeat containing 7. (1493 aa)
	SLC9A3R1	SLC9A3 regulator 1. (211 aa)
	SHANK2	SH3 and multiple ankyrin repeat domains 2. (1758 aa)
	PDZK1	PDZ domain containing 1. (603 aa)
	CASK	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (859 aa)
	SNTG2	Syntrophin gamma 2. (517 aa)
	U3JH65_FICAL	Uncharacterized protein. (1312 aa)
	HTRA1	HtrA serine peptidase 1. (378 aa)
	PDZD2	Pro-interleukin-16; Interleukin-16 stimulates a migratory response in CD4+ lymphocytes, monocytes, and eosinophils. Primes CD4+ T-cells for IL-2 and IL-15 responsiveness. Also induces T-lymphocyte expression of interleukin 2 receptor. Ligand for CD4. (2776 aa)
	PDZD8	PDZ domain containing 8. (999 aa)
	STXBP4	Syntaxin binding protein 4. (546 aa)
	DEPTOR	DEP domain containing MTOR interacting protein. (397 aa)
	SNTB1	Syntrophin beta 1. (458 aa)
	U3JK31_FICAL	PDZ domain-containing protein. (220 aa)
	RAPGEF2	Rap guanine nucleotide exchange factor 2. (1609 aa)
	CYTIP	PDZ domain-containing protein. (137 aa)
	TJP2	Uncharacterized protein; Belongs to the MAGUK family. (1313 aa)
	LNX1	Ligand of numb-protein X 1. (732 aa)
	SLC9A3R2	Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. (378 aa)
	PARD3B	Uncharacterized protein. (997 aa)
	U3JN63_FICAL	Uncharacterized protein. (1013 aa)
	MPP4	Membrane palmitoylated protein 4; Belongs to the MAGUK family. (617 aa)
	PDZD11	PDZ domain containing 11. (118 aa)
	CNKSR2	Connector enhancer of kinase suppressor of Ras 2. (805 aa)
	FRMPD4	FERM and PDZ domain containing 4. (1277 aa)
	SHROOM2	Shroom family member 2. (965 aa)
	U3JPW8_FICAL	PDZ domain-containing protein. (448 aa)
	TIAM1	T cell lymphoma invasion and metastasis 1. (1528 aa)
	PARD6G	Par-6 family cell polarity regulator gamma. (361 aa)
	APBA1	Amyloid beta precursor protein binding family A member 1. (830 aa)
	SIPA1L1	Signal induced proliferation associated 1 like 1. (1784 aa)
	LOC101809977	PDZ domain-containing protein. (146 aa)
	MPP5	Membrane palmitoylated protein 5; Belongs to the MAGUK family. (679 aa)
	PREX2	Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2. (1606 aa)
	RGS3	Regulator of G protein signaling 3. (1054 aa)
	WHRN	Whirlin. (769 aa)
	PTPN13	Protein tyrosine phosphatase non-receptor type 13. (2513 aa)
	SNTG1	Syntrophin gamma 1. (517 aa)
	GIPC2	GIPC PDZ domain containing family member 2. (262 aa)
	SDCBP2	Syndecan binding protein 2. (296 aa)
	IL16	Pro-interleukin-16; Interleukin-16 stimulates a migratory response in CD4+ lymphocytes, monocytes, and eosinophils. Primes CD4+ T-cells for IL-2 and IL-15 responsiveness. Also induces T-lymphocyte expression of interleukin 2 receptor. Ligand for CD4. (1314 aa)
	ARHGEF12	Rho guanine nucleotide exchange factor 12. (1602 aa)
	TAX1BP3	Tax1-binding protein 3; May regulate a number of protein-protein interactions by competing for PDZ domain binding sites. (124 aa)
	RIMS2	Regulating synaptic membrane exocytosis 2. (1570 aa)
	PDLIM5	PDZ and LIM domain 5. (614 aa)
	MYO18A	Myosin XVIIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2052 aa)
	MPDZ	Multiple PDZ domain crumbs cell polarity complex component. (2142 aa)
	LDB3	LIM domain binding 3. (713 aa)
	DLG5	Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family. (1936 aa)
	PARD6A	Par-6 family cell polarity regulator alpha. (327 aa)
	RIMS1	Regulating synaptic membrane exocytosis 1. (1111 aa)
	PARD3	Par-3 family cell polarity regulator. (1277 aa)
	SYNPO2L	Synaptopodin 2 like. (1020 aa)
	NOS1	Nitric oxide synthase; Produces nitric oxide (NO). (1435 aa)
	PDLIM1	PDZ and LIM domain 1. (329 aa)
	DLG1	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family. (928 aa)
	MPP7	Membrane palmitoylated protein 7; Belongs to the MAGUK family. (589 aa)
	SNX27	Sorting nexin 27. (543 aa)
	ARHGAP21	Rho GTPase activating protein 21. (2001 aa)
	PTPN20	Uncharacterized protein. (693 aa)
	FRMPD2	FERM and PDZ domain containing 2. (1330 aa)
	LIMK2	LIM domain kinase 2. (642 aa)
	DLG2	Discs large MAGUK scaffold protein 2. (902 aa)
	DVL3	Dishevelled segment polarity protein 3. (671 aa)
	U3K028_FICAL	PDZ domain-containing protein. (253 aa)
	INTU	Inturned planar cell polarity protein. (910 aa)
	SHROOM3	Shroom family member 3. (1956 aa)
	LNX2	Ligand of numb-protein X 2. (687 aa)
	SCRIB	Scribble planar cell polarity protein. (1377 aa)
	PDZD7	PDZ domain containing 7. (908 aa)
	PDLIM7	PDZ and LIM domain 7. (721 aa)
	PSMD9	PDZ domain-containing protein. (216 aa)
	PDLIM4	PDZ and LIM domain 4. (380 aa)
	DVL1	Dishevelled segment polarity protein 1. (687 aa)
	MAST2	Microtubule associated serine/threonine kinase 2. (1950 aa)
	RHPN1	Rhophilin Rho GTPase binding protein 1. (616 aa)
	MPP6	Membrane palmitoylated protein 6; Belongs to the MAGUK family. (546 aa)
	HTRA3	HtrA serine peptidase 3. (448 aa)
	RGS12	Regulator of G protein signaling 12. (1505 aa)
	ERBIN	Erbb2 interacting protein. (1454 aa)
	MAST4	Microtubule associated serine/threonine kinase family member 4. (2380 aa)
	GRIP1	Glutamate receptor interacting protein 1. (1160 aa)
	PDZRN4	PDZ domain containing ring finger 4. (836 aa)
	PPP1R9A	Protein phosphatase 1 regulatory subunit 9A. (1343 aa)
	SDCBP	Syndecan binding protein. (296 aa)
	LOC101816087	Uncharacterized protein. (398 aa)
	MAGI2	Membrane associated guanylate kinase, WW and PDZ domain containing 2. (1161 aa)
	LIN7A	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (231 aa)
	PCLO	Piccolo presynaptic cytomatrix protein. (4558 aa)
	LOC101809323	Uncharacterized protein. (680 aa)
	HTRA2	HtrA serine peptidase 2. (332 aa)
	GOPC	PDZ domain-containing protein. (429 aa)
	FRMPD3	FERM and PDZ domain containing 3. (1490 aa)
	MPP1	Membrane palmitoylated protein 1; Belongs to the MAGUK family. (433 aa)
	GIPC3	GIPC PDZ domain containing family member 3. (297 aa)
	TJP3	Tight junction protein 3; Belongs to the MAGUK family. (1055 aa)
	APBA3	Amyloid beta precursor protein binding family A member 3. (382 aa)
	PDLIM3	PDZ and LIM domain 3. (403 aa)
	SHROOM4	Shroom family member 4. (1298 aa)
	DLG3	Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family. (767 aa)
	LIN7C	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (196 aa)
	AFDN	Afadin, adherens junction formation factor. (1746 aa)
	CNKSR3	Uncharacterized protein. (475 aa)
	PATJ	PATJ crumbs cell polarity complex component. (1830 aa)
	TIAM2	T cell lymphoma invasion and metastasis 2. (1726 aa)
	TJP1	Tight junction protein 1; Belongs to the MAGUK family. (1763 aa)
	APBA2	Amyloid beta precursor protein binding family A member 2. (755 aa)
	GRIP2	Glutamate receptor interacting protein 2. (1081 aa)
	PICK1	Protein interacting with PRKCA 1. (406 aa)
	PREX1	Phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1. (1616 aa)
	FRMPD1	FERM and PDZ domain containing 1. (1456 aa)
	PARD6B	Par-6 family cell polarity regulator beta. (371 aa)
	PTPN4	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (929 aa)
	MAGI1	Membrane associated guanylate kinase, WW and PDZ domain containing 1. (1406 aa)
	PDZRN3	PDZ domain containing ring finger 3. (1059 aa)
	SIPA1L2	Signal induced proliferation associated 1 like 2. (1717 aa)
	LIMK1	LIM domain kinase 1. (624 aa)
	RADIL	Rap associating with DIL domain. (851 aa)
	MAST3	Microtubule associated serine/threonine kinase 3. (1410 aa)
	CARD11	Caspase recruitment domain family member 11. (1166 aa)

Your Current Organism:

Ficedula albicollis

NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFDN	LMO7	ENSFALP00000012891	ENSFALP00000000969	Afadin, adherens junction formation factor.	LIM domain 7.	0.484
AFDN	TJP1	ENSFALP00000012891	ENSFALP00000013050	Afadin, adherens junction formation factor.	Tight junction protein 1; Belongs to the MAGUK family.	0.774
AFDN	TJP2	ENSFALP00000012891	ENSFALP00000003275	Afadin, adherens junction formation factor.	Uncharacterized protein; Belongs to the MAGUK family.	0.758
AFDN	TJP3	ENSFALP00000012891	ENSFALP00000012149	Afadin, adherens junction formation factor.	Tight junction protein 3; Belongs to the MAGUK family.	0.661
APBA1	CARD11	ENSFALP00000004957	ENSFALP00000014481	Amyloid beta precursor protein binding family A member 1.	Caspase recruitment domain family member 11.	0.406
APBA1	CASK	ENSFALP00000004957	ENSFALP00000001586	Amyloid beta precursor protein binding family A member 1.	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	0.994
APBA1	DLG1	ENSFALP00000004957	ENSFALP00000007455	Amyloid beta precursor protein binding family A member 1.	Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.	0.406
APBA1	DLG2	ENSFALP00000004957	ENSFALP00000008065	Amyloid beta precursor protein binding family A member 1.	Discs large MAGUK scaffold protein 2.	0.406
APBA1	DLG3	ENSFALP00000004957	ENSFALP00000012549	Amyloid beta precursor protein binding family A member 1.	Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.	0.406
APBA1	DLG5	ENSFALP00000004957	ENSFALP00000007234	Amyloid beta precursor protein binding family A member 1.	Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family.	0.422
APBA1	LIN7A	ENSFALP00000004957	ENSFALP00000010965	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.695
APBA1	LIN7C	ENSFALP00000004957	ENSFALP00000012824	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.695
APBA1	MAGI3	ENSFALP00000004957	ENSFALP00000000789	Amyloid beta precursor protein binding family A member 1.	Membrane associated guanylate kinase, WW and PDZ domain containing 3.	0.570
APBA1	MPP1	ENSFALP00000004957	ENSFALP00000012064	Amyloid beta precursor protein binding family A member 1.	Membrane palmitoylated protein 1; Belongs to the MAGUK family.	0.798
APBA1	MPP3	ENSFALP00000004957	ENSFALP00000000861	Amyloid beta precursor protein binding family A member 1.	Membrane palmitoylated protein 3; Belongs to the MAGUK family.	0.486
APBA1	MPP4	ENSFALP00000004957	ENSFALP00000004273	Amyloid beta precursor protein binding family A member 1.	Membrane palmitoylated protein 4; Belongs to the MAGUK family.	0.486
APBA1	MPP5	ENSFALP00000004957	ENSFALP00000005492	Amyloid beta precursor protein binding family A member 1.	Membrane palmitoylated protein 5; Belongs to the MAGUK family.	0.486
APBA1	MPP6	ENSFALP00000004957	ENSFALP00000009975	Amyloid beta precursor protein binding family A member 1.	Membrane palmitoylated protein 6; Belongs to the MAGUK family.	0.714
APBA1	MPP7	ENSFALP00000004957	ENSFALP00000007456	Amyloid beta precursor protein binding family A member 1.	Membrane palmitoylated protein 7; Belongs to the MAGUK family.	0.486
APBA1	RIMS1	ENSFALP00000004957	ENSFALP00000007329	Amyloid beta precursor protein binding family A member 1.	Regulating synaptic membrane exocytosis 1.	0.415