STRINGSTRING
RAF1 RAF1 U3JBR7_FICAL U3JBR7_FICAL TUBA1C TUBA1C BIRC2 BIRC2 ATM ATM MAP2K2 MAP2K2 LMNB1 LMNB1 FADD FADD SPTAN1 SPTAN1 ENDOG ENDOG XIAP XIAP TRAF1 TRAF1 DAB2IP DAB2IP CASP7 CASP7 ERN1 ERN1 CTSB CTSB LMNA LMNA TUBA1C-2 TUBA1C-2 AKT1 AKT1 NRAS NRAS CTSL CTSL KRAS KRAS ITPR3 ITPR3 ITPR2 ITPR2 BAK1 BAK1 PIK3CB PIK3CB CASP8 CASP8 U3JNE7_FICAL U3JNE7_FICAL CASP10 CASP10 CFLAR CFLAR TUBA4A TUBA4A LOC101808801 LOC101808801 CASP2 CASP2 CTSS CTSS GADD45G GADD45G TNFRSF1A TNFRSF1A EIF2S1 EIF2S1 LOC101820289 LOC101820289 BCL2L1 BCL2L1 PTPN13 PTPN13 MAPK10 MAPK10 BCL2A1 BCL2A1 NFKBIA NFKBIA FOS FOS IKBKB IKBKB CASP6 CASP6 U3JWB1_FICAL U3JWB1_FICAL DFFA DFFA PIK3CD PIK3CD MAPK8 MAPK8 BIRC5 BIRC5 TRADD TRADD FAS FAS MAPK9 MAPK9 FASLG FASLG CTSC CTSC MAPK1 MAPK1 NFKB1 NFKB1 PIK3CA PIK3CA TNFSF10 TNFSF10 PARP3 PARP3 DIABLO DIABLO CTSO CTSO PIK3R3 PIK3R3 U3K4K5_FICAL U3K4K5_FICAL MAP3K14 MAP3K14 TUBA8 TUBA8 BID BID DFFB DFFB PIK3R1 PIK3R1 MAP2K1 MAP2K1 PIDD1 PIDD1 CTSZ CTSZ APAF1 APAF1 CTSH CTSH HTRA2 HTRA2 LOC101809744 LOC101809744 CAPN11 CAPN11 U3KA53_FICAL U3KA53_FICAL AKT3 AKT3 PARP1 PARP1 AIFM1 AIFM1 TUBAL3 TUBAL3 CTSD CTSD CASP3 CASP3 CAPN2 CAPN2 LMNB2 LMNB2 HRAS HRAS ATF4 ATF4 MAP3K5 MAP3K5 CHUK CHUK BCL2 BCL2 RIPK1 RIPK1 ITPR1 ITPR1 SEPT4 SEPT4 ACTB ACTB PIK3R2 PIK3R2 PDPK1 PDPK1 NGF NGF JUN JUN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RAF1Raf-1 proto-oncogene, serine/threonine kinase. (667 aa)
U3JBR7_FICALTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (479 aa)
TUBA1CTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
BIRC2Uncharacterized protein. (611 aa)
ATMNon-specific serine/threonine protein kinase. (3066 aa)
MAP2K2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (398 aa)
LMNB1Lamin B1; Belongs to the intermediate filament family. (584 aa)
FADDFas associated via death domain. (227 aa)
SPTAN1Spectrin alpha, non-erythrocytic 1. (2510 aa)
ENDOGEndonuclease. (249 aa)
XIAPX-linked inhibitor of apoptosis. (491 aa)
TRAF1TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
DAB2IPDAB2 interacting protein. (1148 aa)
CASP7Caspase 7; Belongs to the peptidase C14A family. (310 aa)
ERN1Endoplasmic reticulum to nucleus signaling 1. (971 aa)
CTSBCathepsin B; Belongs to the peptidase C1 family. (341 aa)
LMNALamin A/C; Belongs to the intermediate filament family. (654 aa)
TUBA1C-2Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (399 aa)
AKT1Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
NRASNRAS proto-oncogene, GTPase. (156 aa)
CTSLUncharacterized protein; Belongs to the peptidase C1 family. (337 aa)
KRASKRAS proto-oncogene, GTPase. (188 aa)
ITPR3Inositol 1,4,5-trisphosphate receptor type 3. (2664 aa)
ITPR2Inositol 1,4,5-trisphosphate receptor type 2. (2692 aa)
BAK1BCL2 antagonist/killer 1. (213 aa)
PIK3CBPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1066 aa)
CASP8Caspase 8; Belongs to the peptidase C14A family. (507 aa)
U3JNE7_FICALUncharacterized protein; Belongs to the peptidase C14A family. (468 aa)
CASP10Caspase 10; Belongs to the peptidase C14A family. (484 aa)
CFLARCASP8 and FADD like apoptosis regulator; Belongs to the peptidase C14A family. (489 aa)
TUBA4ATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
LOC101808801Uncharacterized protein. (183 aa)
CASP2Caspase 2; Belongs to the peptidase C14A family. (422 aa)
CTSSUncharacterized protein; Belongs to the peptidase C1 family. (328 aa)
GADD45GGrowth arrest and DNA damage inducible gamma. (159 aa)
TNFRSF1AUncharacterized protein. (429 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit alpha. (317 aa)
LOC101820289Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
BCL2L1BCL2 like 1. (230 aa)
PTPN13Protein tyrosine phosphatase non-receptor type 13. (2513 aa)
MAPK10Mitogen-activated protein kinase. (426 aa)
BCL2A1BCL2 related protein A1. (174 aa)
NFKBIAANK_REP_REGION domain-containing protein. (313 aa)
FOSFos proto-oncogene, AP-1 transcription factor subunit. (371 aa)
IKBKBInhibitor of nuclear factor kappa B kinase subunit beta. (693 aa)
CASP6Caspase 6; Belongs to the peptidase C14A family. (305 aa)
U3JWB1_FICALUncharacterized protein. (221 aa)
DFFADNA fragmentation factor subunit alpha. (280 aa)
PIK3CDPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1046 aa)
MAPK8Mitogen-activated protein kinase. (384 aa)
BIRC5Baculoviral IAP repeat containing 5. (140 aa)
TRADDTNFRSF1A associated via death domain. (306 aa)
FASFas cell surface death receptor. (369 aa)
MAPK9Mitogen-activated protein kinase. (424 aa)
FASLGFas ligand; Belongs to the tumor necrosis factor family. (283 aa)
CTSCCathepsin C; Belongs to the peptidase C1 family. (435 aa)
MAPK1Mitogen-activated protein kinase. (321 aa)
NFKB1Nuclear factor kappa B subunit 1. (982 aa)
PIK3CAPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
TNFSF10TNF superfamily member 10; Belongs to the tumor necrosis factor family. (301 aa)
PARP3Poly [ADP-ribose] polymerase. (530 aa)
DIABLOUncharacterized protein. (273 aa)
CTSOCathepsin O; Belongs to the peptidase C1 family. (371 aa)
PIK3R3Uncharacterized protein. (753 aa)
U3K4K5_FICALCytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (102 aa)
MAP3K14Mitogen-activated protein kinase kinase kinase 14. (941 aa)
TUBA8Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
BIDBH3-interacting domain death agonist; Counters the protective effect of Bcl-2. (184 aa)
DFFBDNA fragmentation factor subunit beta. (250 aa)
PIK3R1Phosphoinositide-3-kinase regulatory subunit 1. (724 aa)
MAP2K1Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (404 aa)
PIDD1P53-induced death domain protein 1. (881 aa)
CTSZCathepsin Z; Belongs to the peptidase C1 family. (304 aa)
APAF1Apoptotic peptidase activating factor 1. (1267 aa)
CTSHCathepsin H; Belongs to the peptidase C1 family. (219 aa)
HTRA2HtrA serine peptidase 2. (332 aa)
LOC101809744Uncharacterized protein; Belongs to the intermediate filament family. (583 aa)
CAPN11Calpain 11; Belongs to the peptidase C2 family. (705 aa)
U3KA53_FICALTNFR-Cys domain-containing protein. (228 aa)
AKT3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (971 aa)
AIFM1Apoptosis inducing factor mitochondria associated 1. (575 aa)
TUBAL3Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
CTSDPeptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (396 aa)
CASP3Caspase 3; Belongs to the peptidase C14A family. (282 aa)
CAPN2Calpain 2; Belongs to the peptidase C2 family. (700 aa)
LMNB2Lamin B2; Belongs to the intermediate filament family. (612 aa)
HRASHRas proto-oncogene, GTPase. (189 aa)
ATF4Activating transcription factor 4. (354 aa)
MAP3K5Mitogen-activated protein kinase kinase kinase 5. (1226 aa)
CHUKComponent of inhibitor of nuclear factor kappa B kinase complex. (751 aa)
BCL2BCL2 apoptosis regulator. (239 aa)
RIPK1Receptor interacting serine/threonine kinase 1. (705 aa)
ITPR1Inositol 1,4,5-trisphosphate receptor type 1. (2762 aa)
SEPT4Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (464 aa)
ACTBActin beta. (378 aa)
PIK3R2Uncharacterized protein. (727 aa)
PDPK13-phosphoinositide dependent protein kinase 1. (582 aa)
NGFNerve growth factor; Belongs to the NGF-beta family. (237 aa)
JUNJun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (314 aa)
Your Current Organism:
Ficedula albicollis
NCBI taxonomy Id: 59894
Other names: F. albicollis, collared flycatcher
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