32 items (Cynara cardunculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Ccrd_024331	Cellulose synthase. (64 aa)
	Ccrd_025684	Ammonium_transp domain-containing protein. (77 aa)
	Ccrd_025669	Uncharacterized protein. (94 aa)
	Ccrd_024536	Uncharacterized protein. (291 aa)
	Ccrd_024466	Myc-type, basic helix-loop-helix (BHLH) domain-containing protein. (202 aa)
	Ccrd_026828	Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (850 aa)
	Ccrd_026478	X8-like protein. (165 aa)
	Ccrd_007006	Protein kinase, catalytic domain-containing protein. (100 aa)
	Ccrd_000689	Lateral organ boundaries domain-containing protein. (111 aa)
	Ccrd_023353	SH3 domain-containing protein. (396 aa)
	Ccrd_023226	Uncharacterized protein. (88 aa)
	Ccrd_019911	Nucleotide-binding, alpha-beta plait. (118 aa)
	Ccrd_018688	Uncharacterized protein. (134 aa)
	Ccrd_018566	Uncharacterized protein. (185 aa)
	Ccrd_018280	Glycoside hydrolase, catalytic domain-containing protein. (113 aa)
	Ccrd_013866	Uncharacterized protein. (212 aa)
	Ccrd_013051	Uncharacterized protein. (219 aa)
	Ccrd_012969	GDP-fucose protein O-fucosyltransferase. (513 aa)
	Ccrd_010136	Uncharacterized protein. (272 aa)
	Ccrd_024062	Uncharacterized protein. (88 aa)
	Ccrd_024714	Uncharacterized protein. (88 aa)
	Ccrd_008185	Uncharacterized protein. (78 aa)
	Ccrd_004023	Cytochrome P450. (90 aa)
	Ccrd_018552	GDP-fucose protein O-fucosyltransferase. (392 aa)
	Ccrd_018415	Lateral organ boundaries domain-containing protein. (202 aa)
	Ccrd_012510	ZF-HD homeobox protein, Cys/His-rich dimerization domain-containing protein. (90 aa)
	Ccrd_026774	SMP-LTD domain-containing protein. (62 aa)
	Ccrd_026169	Uncharacterized protein. (105 aa)
	Ccrd_025074	Basic-leucine zipper domain-containing protein. (361 aa)
	Ccrd_005273	Lateral organ boundaries domain-containing protein. (138 aa)
	Ccrd_003865	Uncharacterized protein. (170 aa)
	Ccrd_014681	Lateral organ boundaries domain-containing protein. (133 aa)

Your Current Organism:

Cynara cardunculus

NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ccrd_000689	Ccrd_003865	A0A103XUQ8	A0A124SCK7	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.527
Ccrd_000689	Ccrd_004023	A0A103XUQ8	A0A118JVD9	Lateral organ boundaries domain-containing protein.	Cytochrome P450.	0.499
Ccrd_000689	Ccrd_007006	A0A103XUQ8	A0A103XHR0	Lateral organ boundaries domain-containing protein.	Protein kinase, catalytic domain-containing protein.	0.544
Ccrd_000689	Ccrd_008185	A0A103XUQ8	A0A118JTM3	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.529
Ccrd_000689	Ccrd_010136	A0A103XUQ8	A0A103YLY0	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.526
Ccrd_000689	Ccrd_012510	A0A103XUQ8	A0A118K5J5	Lateral organ boundaries domain-containing protein.	ZF-HD homeobox protein, Cys/His-rich dimerization domain-containing protein.	0.516
Ccrd_000689	Ccrd_012969	A0A103XUQ8	A0A103YGH1	Lateral organ boundaries domain-containing protein.	GDP-fucose protein O-fucosyltransferase.	0.530
Ccrd_000689	Ccrd_013051	A0A103XUQ8	A0A103YGF2	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.537
Ccrd_000689	Ccrd_013866	A0A103XUQ8	A0A103YET9	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.545
Ccrd_000689	Ccrd_018280	A0A103XUQ8	A0A103Y6J3	Lateral organ boundaries domain-containing protein.	Glycoside hydrolase, catalytic domain-containing protein.	0.559
Ccrd_000689	Ccrd_018552	A0A103XUQ8	A0A118K1P1	Lateral organ boundaries domain-containing protein.	GDP-fucose protein O-fucosyltransferase.	0.536
Ccrd_000689	Ccrd_018566	A0A103XUQ8	A0A103Y5Z7	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.537
Ccrd_000689	Ccrd_018688	A0A103XUQ8	A0A103Y5T1	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.560
Ccrd_000689	Ccrd_019911	A0A103XUQ8	A0A103Y3E8	Lateral organ boundaries domain-containing protein.	Nucleotide-binding, alpha-beta plait.	0.554
Ccrd_000689	Ccrd_023226	A0A103XUQ8	A0A103XX66	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.548
Ccrd_000689	Ccrd_023353	A0A103XUQ8	A0A103XWZ1	Lateral organ boundaries domain-containing protein.	SH3 domain-containing protein.	0.565
Ccrd_000689	Ccrd_024062	A0A103XUQ8	A0A118DKU3	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.522
Ccrd_000689	Ccrd_024331	A0A103XUQ8	A0A103D5C8	Lateral organ boundaries domain-containing protein.	Cellulose synthase.	0.566
Ccrd_000689	Ccrd_024466	A0A103XUQ8	A0A103XCF5	Lateral organ boundaries domain-containing protein.	Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.	0.538
Ccrd_000689	Ccrd_024536	A0A103XUQ8	A0A103XC92	Lateral organ boundaries domain-containing protein.	Uncharacterized protein.	0.530

page 1 of 49

Server load: low (26%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About