STRINGSTRING
ABM78809.1 ABM78809.1 ABM78817.1 ABM78817.1 ABM79005.1 ABM79005.1 ABM79219.1 ABM79219.1 rsbW rsbW htpG htpG ABM78152.1 ABM78152.1 phoR phoR sasA sasA nblS nblS gyrB gyrB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABM78809.1Hypothetical protein. (140 aa)
ABM78817.1COG642 Signal transduction histidine kinase [Signal transduction mechanisms]. (496 aa)
ABM79005.1COG642 Signal transduction histidine kinase [Signal transduction mechanisms]. (463 aa)
ABM79219.1COG642 Signal transduction histidine kinase [Signal transduction mechanisms]. (379 aa)
rsbWCOG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms]. (164 aa)
htpGHeat shock protein HtpG; COG326 Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]. (636 aa)
ABM78152.1COG642 Signal transduction histidine kinase [Signal transduction mechanisms]. (444 aa)
phoRTwo-component sensor histidine kinase, phosphate sensing; COG642 Signal transduction histidine kinase [Signal transduction mechanisms]. (361 aa)
sasATwo-component sensor histidine kinase; May be involved in signal transduction. Participates in the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with KaiC. Required for robustness of the circadian rhythm of gene expression and is involved in clock outputs. (370 aa)
nblSCOG5002 Signal transduction histidine kinase [Signal transduction mechanisms]. (685 aa)
gyrBDNA gyrase, subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (655 aa)
Your Current Organism:
Prochlorococcus marinus MIT9303
NCBI taxonomy Id: 59922
Other names: P. marinus str. MIT 9303, Prochlorococcus marinus str. MIT 9303, Prochlorococcus sp. MIT 9303, Prochlorococcus sp. MIT9303
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