STRINGSTRING
secF secF secA secA ABM76962.1 ABM76962.1 ABM76970.1 ABM76970.1 ABM77016.1 ABM77016.1 ABM77136.1 ABM77136.1 rpoB rpoB rpoC1 rpoC1 rpoC2 rpoC2 secG secG rpoZ rpoZ msrA msrA ABM77341.1 ABM77341.1 ABM77575.1 ABM77575.1 dppB dppB ddpA ddpA ABM77663.1 ABM77663.1 ABM77712.1 ABM77712.1 ABM77766.1 ABM77766.1 ABM77829.1 ABM77829.1 ABM77855.1 ABM77855.1 pstS pstS pstS-2 pstS-2 ABM78136.1 ABM78136.1 ahpC ahpC ABM78319.1 ABM78319.1 secD secD pstS-3 pstS-3 ABM78511.1 ABM78511.1 ABM78516.1 ABM78516.1 msrA-2 msrA-2 ABM78643.1 ABM78643.1 fkpA fkpA dppC dppC pdhC pdhC ABM78879.1 ABM78879.1 wzb wzb secY secY rpoA rpoA tufA tufA ABM79140.1 ABM79140.1 ABM79141.1 ABM79141.1 ABM79143.1 ABM79143.1 ABM79149.1 ABM79149.1 ABM79246.1 ABM79246.1 ABM79252.1 ABM79252.1 ABM79474.1 ABM79474.1 secE secE ABM79533.1 ABM79533.1 ndk ndk ABM79723.1 ABM79723.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
secFPreprotein translocase subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecF subfamily. (359 aa)
secAPreprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (951 aa)
ABM76962.1RibD/ribG C-terminal domain; COG1985 Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism]. (238 aa)
ABM76970.1Multidrug efflux MFS family transporter. (411 aa)
ABM77016.1Putative bacterioferritin comigratory (BCP) protein; COG1225 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]. (155 aa)
ABM77136.1COG492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]. (317 aa)
rpoBRNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1097 aa)
rpoC1RNA polymerase gamma subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (634 aa)
rpoC2RNA polymerase beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily. (1374 aa)
secGConserved hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (76 aa)
rpoZPutative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (70 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (223 aa)
ABM77341.1COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]. (250 aa)
ABM77575.1Putative multidrug efflux ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]. (598 aa)
dppBPutative ABC transporter, oligopeptides; COG601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]. (339 aa)
ddpAABC transporter, substrate binding protein, possibly oligopeptides; COG747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism]. (491 aa)
ABM77663.1Thioredoxin; COG526 Thiol-disulfide isomerase and thioredoxins [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]; Belongs to the thioredoxin family. (107 aa)
ABM77712.1Possible MFS family transporter; COG2814 Arabinose efflux permease [Carbohydrate transport and metabolism]. (406 aa)
ABM77766.1Putative proline/betaine transporter, MFS family protein; COG2814 Arabinose efflux permease [Carbohydrate transport and metabolism]. (420 aa)
ABM77829.1Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein; COG1225 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]. (173 aa)
ABM77855.1Multidrug efflux transporter, MFS family protein. (415 aa)
pstSABC transporter, substrate binding protein, phosphate; COG226 ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism]. (304 aa)
pstS-2ABC transporter, substrate binding protein, phosphate. (181 aa)
ABM78136.1ABC transporter, possibly multidrug efflux; COG1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]. (592 aa)
ahpCThioredoxin peroxidase; COG450 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]. (200 aa)
ABM78319.1ABC transporter, multidrug efflux family protein; COG1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]. (583 aa)
secDPreprotein translocase subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (495 aa)
pstS-3ABC transporter, substrate binding protein, phosphate; COG226 ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism]; Belongs to the PstS family. (327 aa)
ABM78511.1Ferritin; Iron-storage protein. (192 aa)
ABM78516.1Ferritin; Iron-storage protein. (177 aa)
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (239 aa)
ABM78643.1Putative bacterioferritin comigratory protein; COG1225 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]. (153 aa)
fkpACOG545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]. (210 aa)
dppCPutative ABC transporter, oligopeptides; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]. (289 aa)
pdhCDihydrolipoamide acetyltransferase; COG508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion]. (439 aa)
ABM78879.1Putative multidrug efflux transporter, MFS family protein; COG2814 Arabinose efflux permease [Carbohydrate transport and metabolism]. (471 aa)
wzbLow molecular weight phosphotyrosine protein phosphatase; COG394 Protein-tyrosine-phosphatase [Signal transduction mechanisms]; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (159 aa)
secYPreprotein translocase SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (439 aa)
rpoABacterial RNA polymerase, alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (312 aa)
tufAElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (399 aa)
ABM79140.1Hypothetical protein; COG457 FOG: TPR repeat [General function prediction only]. (622 aa)
ABM79141.1Hypothetical protein; COG457 FOG: TPR repeat [General function prediction only]. (764 aa)
ABM79143.1COG3063 Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]. (725 aa)
ABM79149.1Hypothetical protein; COG457 FOG: TPR repeat [General function prediction only]. (661 aa)
ABM79246.1Conserved hypothetical protein. (221 aa)
ABM79252.1Possible ABC transporter; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]. (291 aa)
ABM79474.1COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]. (245 aa)
secEPutative preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (90 aa)
ABM79533.1Hypothetical protein. (533 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (152 aa)
ABM79723.1Multidrug efflux transporter, MFS family protein; COG2814 Arabinose efflux permease [Carbohydrate transport and metabolism]. (435 aa)
Your Current Organism:
Prochlorococcus marinus MIT9303
NCBI taxonomy Id: 59922
Other names: P. marinus str. MIT 9303, Prochlorococcus marinus str. MIT 9303, Prochlorococcus sp. MIT 9303, Prochlorococcus sp. MIT9303
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