STRINGSTRING
rfbC rfbC rfbD rfbD ABM76856.1 ABM76856.1 ABM76864.1 ABM76864.1 ABM76867.1 ABM76867.1 rfbB rfbB ABM76894.1 ABM76894.1 rfbG rfbG ABM76896.1 ABM76896.1 wecB wecB ABM77715.1 ABM77715.1 glmU glmU rfbD-2 rfbD-2 ABM79269.1 ABM79269.1 ugd ugd galE galE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (201 aa)
rfbDPutative dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (311 aa)
ABM76856.1COG451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]. (324 aa)
ABM76864.1COG381 UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]. (386 aa)
ABM76867.1COG399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]; Belongs to the DegT/DnrJ/EryC1 family. (395 aa)
rfbBCOG1088 dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (364 aa)
ABM76894.1Glucose-1-phosphate cytidylyltransferase; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure an. (255 aa)
rfbGCDP-glucose 4,6-dehydratase; COG451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]. (365 aa)
ABM76896.1NDP-hexose 3,4-dehydratase; COG399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]; Belongs to the DegT/DnrJ/EryC1 family. (514 aa)
wecBCOG381 UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (370 aa)
ABM77715.1Possible sugar-phosphate nucleotidyl transferase; COG662 Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]. (127 aa)
glmUUDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (470 aa)
rfbD-2dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (287 aa)
ABM79269.1COG451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]. (340 aa)
ugdCOG1004 Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]. (482 aa)
galEUDP-glucose-4-epimerase; COG1087 UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]. (348 aa)
Your Current Organism:
Prochlorococcus marinus MIT9303
NCBI taxonomy Id: 59922
Other names: P. marinus str. MIT 9303, Prochlorococcus marinus str. MIT 9303, Prochlorococcus sp. MIT 9303, Prochlorococcus sp. MIT9303
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