(7 nodes) Mixed, incl. Zinc-binding ribosomal protein, and Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like network (Prochlorococcus marinus GP2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	rplL	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (131 aa)
	rpsD	SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (188 aa)
	rpmG	LSU ribosomal protein L33p; Alternative locus ID: PGP2_1269; Belongs to the bacterial ribosomal protein bL33 family. (64 aa)
	rpmF	LSU ribosomal protein L32p; Alternative locus ID: PGP2_1292; Belongs to the bacterial ribosomal protein bL32 family. (56 aa)
	rpsI	SSU ribosomal protein S9p (S16e); Alternative locus ID: PGP2_0299; Belongs to the universal ribosomal protein uS9 family. (136 aa)
	rplM	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (143 aa)
	rplQ	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302. (116 aa)

Your Current Organism:

Prochlorococcus marinus GP2

NCBI taxonomy Id: 59925
Other names: P. marinus str. GP2, Prochlorococcus marinus str. GP2, Prochlorococcus marinus str. RCC296, Prochlorococcus sp. GP2, Prochlorococcus sp. RCC296

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplL	rplM	EU91_0371	EU91_1699	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplL	rplQ	EU91_0371	EU91_1701	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	0.999
rplL	rpmF	EU91_0371	EU91_0986	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L32p; Alternative locus ID: PGP2_1292; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplL	rpmG	EU91_0371	EU91_0963	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L33p; Alternative locus ID: PGP2_1269; Belongs to the bacterial ribosomal protein bL33 family.	0.999
rplL	rpsD	EU91_0371	EU91_0574	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplL	rpsI	EU91_0371	EU91_1698	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S9p (S16e); Alternative locus ID: PGP2_0299; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rplL	EU91_1699	EU91_0371	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.999
rplM	rplQ	EU91_1699	EU91_1701	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	0.999
rplM	rpmF	EU91_1699	EU91_0986	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L32p; Alternative locus ID: PGP2_1292; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplM	rpmG	EU91_1699	EU91_0963	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L33p; Alternative locus ID: PGP2_1269; Belongs to the bacterial ribosomal protein bL33 family.	0.999
rplM	rpsD	EU91_1699	EU91_0574	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplM	rpsI	EU91_1699	EU91_1698	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S9p (S16e); Alternative locus ID: PGP2_0299; Belongs to the universal ribosomal protein uS9 family.	0.999
rplQ	rplL	EU91_1701	EU91_0371	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.999
rplQ	rplM	EU91_1701	EU91_1699	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplQ	rpmF	EU91_1701	EU91_0986	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	LSU ribosomal protein L32p; Alternative locus ID: PGP2_1292; Belongs to the bacterial ribosomal protein bL32 family.	0.999
rplQ	rpmG	EU91_1701	EU91_0963	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	LSU ribosomal protein L33p; Alternative locus ID: PGP2_1269; Belongs to the bacterial ribosomal protein bL33 family.	0.999
rplQ	rpsD	EU91_1701	EU91_0574	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	SSU ribosomal protein S4p (S9e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.999
rplQ	rpsI	EU91_1701	EU91_1698	LSU ribosomal protein L17p; Alternative locus ID: PGP2_0302.	SSU ribosomal protein S9p (S16e); Alternative locus ID: PGP2_0299; Belongs to the universal ribosomal protein uS9 family.	0.999
rpmF	rplL	EU91_0986	EU91_0371	LSU ribosomal protein L32p; Alternative locus ID: PGP2_1292; Belongs to the bacterial ribosomal protein bL32 family.	LSU ribosomal protein L7/L12 (P1/P2); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.999
rpmF	rplM	EU91_0986	EU91_1699	LSU ribosomal protein L32p; Alternative locus ID: PGP2_1292; Belongs to the bacterial ribosomal protein bL32 family.	LSU ribosomal protein L13p (L13Ae); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999

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