(12 nodes) Proteasome core complex network (Fibroporia radiculosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_01546	Proteasome subunit beta. (252 aa)
	FIBRA_03091	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (397 aa)
	FIBRA_07046	Proteasome subunit beta. (240 aa)
	FIBRA_02046	Proteasome subunit beta. (302 aa)
	FIBRA_07615	Proteasome subunit beta. (194 aa)
	FIBRA_00460	Pr_beta_C domain-containing protein. (272 aa)
	FIBRA_01172	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (256 aa)
	FIBRA_02058	Proteasome subunit beta; Belongs to the peptidase T1B family. (279 aa)
	FIBRA_05031	Proteasome subunit alpha type. (224 aa)
	FIBRA_00705	Proteasome subunit alpha type. (280 aa)
	FIBRA_05712	Proteasome endopeptidase complex. (184 aa)
	FIBRA_07044	Proteasome subunit alpha type. (247 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00460	FIBRA_00705	J4HRM9	J4I831	Pr_beta_C domain-containing protein.	Proteasome subunit alpha type.	0.999
FIBRA_00460	FIBRA_01172	J4HRM9	J4HSV9	Pr_beta_C domain-containing protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
FIBRA_00460	FIBRA_01546	J4HRM9	J4G118	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.999
FIBRA_00460	FIBRA_02046	J4HRM9	J4GM77	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.999
FIBRA_00460	FIBRA_02058	J4HRM9	J4HUB0	Pr_beta_C domain-containing protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
FIBRA_00460	FIBRA_03091	J4HRM9	J4G445	Pr_beta_C domain-containing protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
FIBRA_00460	FIBRA_05031	J4HRM9	J4HWV4	Pr_beta_C domain-containing protein.	Proteasome subunit alpha type.	0.999
FIBRA_00460	FIBRA_05712	J4HRM9	J4IAV6	Pr_beta_C domain-containing protein.	Proteasome endopeptidase complex.	0.999
FIBRA_00460	FIBRA_07044	J4HRM9	J4IBL1	Pr_beta_C domain-containing protein.	Proteasome subunit alpha type.	0.999
FIBRA_00460	FIBRA_07046	J4HRM9	J4GDA4	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.999
FIBRA_00460	FIBRA_07615	J4HRM9	J4H4Q5	Pr_beta_C domain-containing protein.	Proteasome subunit beta.	0.999
FIBRA_00705	FIBRA_00460	J4I831	J4HRM9	Proteasome subunit alpha type.	Pr_beta_C domain-containing protein.	0.999
FIBRA_00705	FIBRA_01172	J4I831	J4HSV9	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
FIBRA_00705	FIBRA_01546	J4I831	J4G118	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
FIBRA_00705	FIBRA_02046	J4I831	J4GM77	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
FIBRA_00705	FIBRA_02058	J4I831	J4HUB0	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
FIBRA_00705	FIBRA_03091	J4I831	J4G445	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
FIBRA_00705	FIBRA_05031	J4I831	J4HWV4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
FIBRA_00705	FIBRA_05712	J4I831	J4IAV6	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
FIBRA_00705	FIBRA_07044	J4I831	J4IBL1	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999