29 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_01001	Uncharacterized protein. (875 aa)
	FIBRA_03628	Protein kinase domain-containing protein. (712 aa)
	FIBRA_06217	Uncharacterized protein. (218 aa)
	FIBRA_08146	Uncharacterized protein. (1518 aa)
	FIBRA_08822	Uncharacterized protein. (220 aa)
	FIBRA_08908	Pkinase_fungal domain-containing protein. (279 aa)
	FIBRA_01691	Uncharacterized protein. (676 aa)
	FIBRA_02425	Protein kinase domain-containing protein. (943 aa)
	FIBRA_03524	Uncharacterized protein. (855 aa)
	FIBRA_07967	Uncharacterized protein; Belongs to the syntaxin family. (1827 aa)
	FIBRA_00564	Uncharacterized protein. (451 aa)
	FIBRA_01002	Uncharacterized protein. (1072 aa)
	FIBRA_02434	Uncharacterized protein. (163 aa)
	FIBRA_02513	Rab-GAP TBC domain-containing protein. (316 aa)
	FIBRA_02886	Uncharacterized protein. (227 aa)
	FIBRA_04145	Uncharacterized protein. (1000 aa)
	FIBRA_06922	Uncharacterized protein. (2387 aa)
	FIBRA_01460	Uncharacterized protein. (587 aa)
	FIBRA_02432	SH3 domain-containing protein. (1401 aa)
	FIBRA_03632	Uncharacterized protein. (502 aa)
	FIBRA_06379	Rab-GAP TBC domain-containing protein. (1208 aa)
	FIBRA_01825	Non-specific serine/threonine protein kinase. (1142 aa)
	FIBRA_02540	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (188 aa)
	FIBRA_03290	Protein kinase domain-containing protein. (532 aa)
	FIBRA_03884	Uncharacterized protein. (1817 aa)
	FIBRA_07886	Uncharacterized protein. (674 aa)
	FIBRA_08542	Uncharacterized protein. (247 aa)
	FIBRA_08750	Uncharacterized protein. (543 aa)
	FIBRA_08956	Uncharacterized protein. (108 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00564	FIBRA_02432	J4H087	J4HUY1	Uncharacterized protein.	SH3 domain-containing protein.	0.499
FIBRA_00564	FIBRA_02434	J4H087	J4H1U9	Uncharacterized protein.	Uncharacterized protein.	0.499
FIBRA_00564	FIBRA_02513	J4H087	J4H1W4	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.489
FIBRA_00564	FIBRA_03290	J4H087	J4I9I9	Uncharacterized protein.	Protein kinase domain-containing protein.	0.775
FIBRA_00564	FIBRA_03524	J4H087	J4GNI9	Uncharacterized protein.	Uncharacterized protein.	0.570
FIBRA_00564	FIBRA_03632	J4H087	J4HW35	Uncharacterized protein.	Uncharacterized protein.	0.570
FIBRA_00564	FIBRA_06217	J4H087	J4GAU4	Uncharacterized protein.	Uncharacterized protein.	0.683
FIBRA_00564	FIBRA_06379	J4H087	J4HZ05	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.489
FIBRA_00564	FIBRA_08542	J4H087	J4ICE9	Uncharacterized protein.	Uncharacterized protein.	0.683
FIBRA_00564	FIBRA_08750	J4H087	J4ICI7	Uncharacterized protein.	Uncharacterized protein.	0.570
FIBRA_00564	FIBRA_08908	J4H087	J4GIH6	Uncharacterized protein.	Pkinase_fungal domain-containing protein.	0.594
FIBRA_01001	FIBRA_01002	J4G0Q9	J4H0V2	Uncharacterized protein.	Uncharacterized protein.	0.619
FIBRA_01001	FIBRA_02513	J4G0Q9	J4H1W4	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.964
FIBRA_01001	FIBRA_03884	J4G0Q9	J4I9V4	Uncharacterized protein.	Uncharacterized protein.	0.422
FIBRA_01001	FIBRA_06217	J4G0Q9	J4GAU4	Uncharacterized protein.	Uncharacterized protein.	0.528
FIBRA_01001	FIBRA_06379	J4G0Q9	J4HZ05	Uncharacterized protein.	Rab-GAP TBC domain-containing protein.	0.911
FIBRA_01001	FIBRA_07967	J4G0Q9	J4GVX9	Uncharacterized protein.	Uncharacterized protein; Belongs to the syntaxin family.	0.422
FIBRA_01001	FIBRA_08822	J4G0Q9	J4GIB5	Uncharacterized protein.	Uncharacterized protein.	0.950
FIBRA_01002	FIBRA_01001	J4H0V2	J4G0Q9	Uncharacterized protein.	Uncharacterized protein.	0.619
FIBRA_01002	FIBRA_01825	J4H0V2	J4I8Q1	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.769