STRINGSTRING
FIBRA_00885 FIBRA_00885 LSM8 LSM8 FIBRA_01730 FIBRA_01730 FIBRA_02587 FIBRA_02587 FIBRA_03342 FIBRA_03342 FIBRA_03653 FIBRA_03653 FIBRA_04165 FIBRA_04165 FIBRA_04501 FIBRA_04501 FIBRA_04567 FIBRA_04567 FIBRA_04605 FIBRA_04605 FIBRA_05027 FIBRA_05027 FIBRA_05213 FIBRA_05213 FIBRA_05652 FIBRA_05652 FIBRA_05874 FIBRA_05874 FIBRA_06374 FIBRA_06374 FIBRA_07001 FIBRA_07001 FIBRA_07780 FIBRA_07780 FIBRA_07914 FIBRA_07914 FIBRA_08141 FIBRA_08141 FIBRA_08340 FIBRA_08340 FIBRA_08492 FIBRA_08492 FIBRA_00380 FIBRA_00380 FIBRA_00652 FIBRA_00652 FIBRA_00760 FIBRA_00760 FIBRA_00825 FIBRA_00825 FIBRA_09009 FIBRA_09009 FIBRA_01066 FIBRA_01066 FIBRA_02285 FIBRA_02285 FIBRA_02355 FIBRA_02355 FIBRA_02615 FIBRA_02615 FIBRA_02621 FIBRA_02621 FIBRA_03655 FIBRA_03655 FIBRA_03681 FIBRA_03681 FIBRA_03706 FIBRA_03706 FIBRA_03764 FIBRA_03764 FIBRA_03801 FIBRA_03801 FIBRA_04470 FIBRA_04470 FIBRA_04498 FIBRA_04498 FIBRA_04678 FIBRA_04678 FIBRA_04957 FIBRA_04957 FIBRA_05142 FIBRA_05142 FIBRA_05163 FIBRA_05163 FIBRA_05515 FIBRA_05515 FIBRA_06131 FIBRA_06131 FIBRA_06219 FIBRA_06219 FIBRA_06731 FIBRA_06731 FIBRA_06766 FIBRA_06766 FIBRA_06871 FIBRA_06871 FIBRA_06881 FIBRA_06881 FIBRA_06886 FIBRA_06886 FIBRA_07033 FIBRA_07033 FIBRA_07204 FIBRA_07204 FIBRA_07476 FIBRA_07476 FIBRA_07675 FIBRA_07675 FIBRA_07777 FIBRA_07777 FIBRA_08379 FIBRA_08379 FIBRA_00399 FIBRA_00399 FIBRA_00554 FIBRA_00554 FIBRA_00676 FIBRA_00676 FIBRA_00784 FIBRA_00784 FIBRA_00809 FIBRA_00809 FIBRA_01053 FIBRA_01053 FIBRA_01367 FIBRA_01367 FIBRA_01522 FIBRA_01522 FIBRA_01705 FIBRA_01705 FIBRA_01974 FIBRA_01974 FIBRA_02252 FIBRA_02252 FIBRA_02369 FIBRA_02369 FIBRA_02538 FIBRA_02538 FIBRA_02986 FIBRA_02986 FIBRA_03553 FIBRA_03553 FIBRA_04421 FIBRA_04421 FIBRA_05260 FIBRA_05260 FIBRA_05535 FIBRA_05535 FIBRA_05700 FIBRA_05700 FIBRA_05813 FIBRA_05813 FIBRA_06213 FIBRA_06213 FIBRA_07388 FIBRA_07388 FIBRA_07636 FIBRA_07636 FIBRA_07915 FIBRA_07915 FIBRA_07936 FIBRA_07936 FIBRA_07956 FIBRA_07956 FIBRA_08012 FIBRA_08012 FIBRA_08285 FIBRA_08285 FIBRA_08341 FIBRA_08341 FIBRA_08442 FIBRA_08442 FIBRA_08932 FIBRA_08932 FIBRA_00557 FIBRA_00557 FIBRA_00711 FIBRA_00711 FIBRA_00863 FIBRA_00863 FIBRA_01095 FIBRA_01095 FIBRA_01435 FIBRA_01435 FIBRA_01595 FIBRA_01595 FIBRA_01992 FIBRA_01992 FIBRA_01997 FIBRA_01997 FIBRA_02235 FIBRA_02235 FIBRA_02266 FIBRA_02266 FIBRA_02757 FIBRA_02757 FIBRA_02984 FIBRA_02984 FIBRA_03326 FIBRA_03326 FIBRA_03551 FIBRA_03551 FIBRA_04287 FIBRA_04287 FIBRA_04442 FIBRA_04442 FIBRA_04472 FIBRA_04472 FIBRA_05759 FIBRA_05759 FIBRA_06100 FIBRA_06100 FIBRA_06272 FIBRA_06272 FIBRA_06579 FIBRA_06579 FIBRA_06627 FIBRA_06627 FIBRA_06698 FIBRA_06698 FIBRA_06779 FIBRA_06779 FIBRA_06888 FIBRA_06888 FIBRA_07050 FIBRA_07050 FIBRA_07244 FIBRA_07244 FIBRA_07309 FIBRA_07309 FIBRA_07484 FIBRA_07484 FIBRA_07556 FIBRA_07556 FIBRA_07571 FIBRA_07571 FIBRA_07661 FIBRA_07661 FIBRA_07743 FIBRA_07743 FIBRA_07851 FIBRA_07851 FIBRA_07913 FIBRA_07913 FIBRA_08533 FIBRA_08533 FIBRA_08668 FIBRA_08668 FIBRA_00673 FIBRA_00673 FIBRA_01619 FIBRA_01619 FIBRA_01640 FIBRA_01640 FIBRA_02088 FIBRA_02088 FIBRA_02468 FIBRA_02468 FIBRA_02585 FIBRA_02585 FIBRA_03437 FIBRA_03437 FIBRA_03483 FIBRA_03483 FIBRA_03545 FIBRA_03545 FIBRA_03729 FIBRA_03729 FIBRA_03879 FIBRA_03879 FIBRA_03952 FIBRA_03952 FIBRA_04163 FIBRA_04163 FIBRA_04451 FIBRA_04451 FIBRA_04514 FIBRA_04514 FIBRA_04884 FIBRA_04884 FIBRA_04889 FIBRA_04889 FIBRA_05000 FIBRA_05000 FIBRA_05046 FIBRA_05046 FIBRA_05758 FIBRA_05758 FIBRA_05918 FIBRA_05918 FIBRA_06467 FIBRA_06467 FIBRA_06898 FIBRA_06898 FIBRA_06909 FIBRA_06909 FIBRA_07024 FIBRA_07024 FIBRA_07029 FIBRA_07029 FIBRA_07034 FIBRA_07034 FIBRA_07049 FIBRA_07049 FIBRA_07277 FIBRA_07277 FIBRA_07845 FIBRA_07845 FIBRA_08067 FIBRA_08067 FIBRA_08343 FIBRA_08343 FIBRA_08439 FIBRA_08439 FIBRA_08532 FIBRA_08532 FIBRA_00256 FIBRA_00256 FIBRA_00261 FIBRA_00261 FIBRA_09424 FIBRA_09424 FIBRA_00089 FIBRA_00089 FIBRA_00134 FIBRA_00134 FIBRA_00298 FIBRA_00298 FIBRA_00045 FIBRA_00045 FIBRA_00135 FIBRA_00135 FIBRA_00047 FIBRA_00047 FIBRA_00282 FIBRA_00282 FIBRA_09208 FIBRA_09208
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FIBRA_00885WD_REPEATS_REGION domain-containing protein. (435 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
FIBRA_01730Uncharacterized protein. (664 aa)
FIBRA_02587Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (142 aa)
FIBRA_03342Uncharacterized protein. (292 aa)
FIBRA_03653DUF1716 domain-containing protein. (602 aa)
FIBRA_04165Uncharacterized protein. (1174 aa)
FIBRA_04501SNRNP27 domain-containing protein. (249 aa)
FIBRA_04567Uncharacterized protein. (1020 aa)
FIBRA_04605GH16 domain-containing protein. (383 aa)
FIBRA_05027Uncharacterized protein. (249 aa)
FIBRA_05213Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (222 aa)
FIBRA_05652FHA domain-containing protein. (290 aa)
FIBRA_05874Uncharacterized protein. (608 aa)
FIBRA_06374Matrin-type domain-containing protein. (238 aa)
FIBRA_07001Uncharacterized protein. (302 aa)
FIBRA_07780RRM domain-containing protein. (123 aa)
FIBRA_07914Cir_N domain-containing protein. (97 aa)
FIBRA_08141RRM domain-containing protein. (200 aa)
FIBRA_08340Uncharacterized protein. (290 aa)
FIBRA_08492WD_REPEATS_REGION domain-containing protein. (446 aa)
FIBRA_00380Sde2_N_Ubi domain-containing protein. (284 aa)
FIBRA_00652Uncharacterized protein. (370 aa)
FIBRA_00760Uncharacterized protein. (316 aa)
FIBRA_00825WD_REPEATS_REGION domain-containing protein. (737 aa)
FIBRA_09009G-patch domain-containing protein. (344 aa)
FIBRA_01066Uncharacterized protein. (353 aa)
FIBRA_02285U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (582 aa)
FIBRA_02355WD_REPEATS_REGION domain-containing protein. (532 aa)
FIBRA_02615Uncharacterized protein. (361 aa)
FIBRA_02621WD_REPEATS_REGION domain-containing protein. (1698 aa)
FIBRA_03655RRM domain-containing protein. (220 aa)
FIBRA_03681Uncharacterized protein. (263 aa)
FIBRA_03706Uncharacterized protein. (1649 aa)
FIBRA_03764Uncharacterized protein. (416 aa)
FIBRA_03801RRM domain-containing protein. (352 aa)
FIBRA_04470RRM domain-containing protein. (156 aa)
FIBRA_04498Nuclear cap-binding protein subunit 2. (224 aa)
FIBRA_04678RED_N domain-containing protein. (451 aa)
FIBRA_04957Uncharacterized protein. (772 aa)
FIBRA_05142Protein kinase domain-containing protein. (679 aa)
FIBRA_05163JAB_MPN domain-containing protein. (2338 aa)
FIBRA_05515Nop domain-containing protein. (537 aa)
FIBRA_06131Uncharacterized protein. (879 aa)
FIBRA_06219Uncharacterized protein. (256 aa)
FIBRA_06731Protein kinase domain-containing protein. (735 aa)
FIBRA_06766Uncharacterized protein. (322 aa)
FIBRA_06871PPIase cyclophilin-type domain-containing protein. (340 aa)
FIBRA_06881SFM domain-containing protein. (383 aa)
FIBRA_06886RRM domain-containing protein. (372 aa)
FIBRA_07033Uncharacterized protein. (478 aa)
FIBRA_07204Uncharacterized protein. (369 aa)
FIBRA_07476WD_REPEATS_REGION domain-containing protein. (1601 aa)
FIBRA_07675NmrA domain-containing protein. (327 aa)
FIBRA_07777U1-type domain-containing protein. (528 aa)
FIBRA_08379Sister chromatid cohesion protein. (2713 aa)
FIBRA_00399Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
FIBRA_00554Uncharacterized protein. (441 aa)
FIBRA_00676Nkap_C domain-containing protein. (513 aa)
FIBRA_00784Uncharacterized protein. (485 aa)
FIBRA_00809Uncharacterized protein. (551 aa)
FIBRA_01053Uncharacterized protein. (599 aa)
FIBRA_01367Uncharacterized protein. (720 aa)
FIBRA_01522DUF1793 domain-containing protein. (364 aa)
FIBRA_01705Uncharacterized protein. (826 aa)
FIBRA_01974Uncharacterized protein. (1252 aa)
FIBRA_02252Uncharacterized protein. (965 aa)
FIBRA_02369Uncharacterized protein. (506 aa)
FIBRA_02538PSP domain-containing protein. (622 aa)
FIBRA_02986Uncharacterized protein. (1280 aa)
FIBRA_03553Uncharacterized protein. (737 aa)
FIBRA_04421Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (447 aa)
FIBRA_05260Uncharacterized protein. (139 aa)
FIBRA_05535Sm domain-containing protein. (88 aa)
FIBRA_05700Uncharacterized protein. (905 aa)
FIBRA_05813Tr-type G domain-containing protein. (1487 aa)
FIBRA_06213U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (241 aa)
FIBRA_07388Uncharacterized protein. (528 aa)
FIBRA_07636Uncharacterized protein. (752 aa)
FIBRA_07915Uncharacterized protein. (174 aa)
FIBRA_07936RRM domain-containing protein. (429 aa)
FIBRA_07956Uncharacterized protein. (489 aa)
FIBRA_08012MI domain-containing protein. (941 aa)
FIBRA_08285Pinin_SDK_memA domain-containing protein. (364 aa)
FIBRA_08341Uncharacterized protein. (893 aa)
FIBRA_08442G-patch domain-containing protein. (952 aa)
FIBRA_08932WD_REPEATS_REGION domain-containing protein. (194 aa)
FIBRA_00557Uncharacterized protein. (537 aa)
FIBRA_00711Small nuclear ribonucleoprotein Sm D3. (127 aa)
FIBRA_00863Uncharacterized protein. (785 aa)
FIBRA_01095Matrin-type domain-containing protein. (350 aa)
FIBRA_01435Uncharacterized protein. (742 aa)
FIBRA_01595G-patch domain-containing protein. (473 aa)
FIBRA_01992MFAP1 domain-containing protein. (528 aa)
FIBRA_01997Uncharacterized protein. (815 aa)
FIBRA_02235DUF262 domain-containing protein. (649 aa)
FIBRA_02266PWI domain-containing protein. (528 aa)
FIBRA_02757Uncharacterized protein. (1034 aa)
FIBRA_02984Small nuclear ribonucleoprotein Sm D2. (114 aa)
FIBRA_03326Uncharacterized protein. (441 aa)
FIBRA_03551Uncharacterized protein. (540 aa)
FIBRA_04287WD_REPEATS_REGION domain-containing protein. (670 aa)
FIBRA_04442Uncharacterized protein; Belongs to the DEAD box helicase family. (727 aa)
FIBRA_04472DUF2040 domain-containing protein. (382 aa)
FIBRA_05759Uncharacterized protein. (981 aa)
FIBRA_06100Uncharacterized protein. (255 aa)
FIBRA_06272GH16 domain-containing protein. (395 aa)
FIBRA_06579Uncharacterized protein. (160 aa)
FIBRA_06627Cir_N domain-containing protein. (425 aa)
FIBRA_06698Uncharacterized protein. (325 aa)
FIBRA_06779GYF domain-containing protein. (401 aa)
FIBRA_06888Uncharacterized protein. (287 aa)
FIBRA_07050Uncharacterized protein. (417 aa)
FIBRA_07244G-patch domain-containing protein. (669 aa)
FIBRA_07309Uncharacterized protein. (620 aa)
FIBRA_07484WD_REPEATS_REGION domain-containing protein. (801 aa)
FIBRA_07556RING-type domain-containing protein. (879 aa)
FIBRA_07571Uncharacterized protein. (602 aa)
FIBRA_07661Uncharacterized protein. (423 aa)
FIBRA_07743Uncharacterized protein. (312 aa)
FIBRA_07851SAE2 domain-containing protein. (677 aa)
FIBRA_07913Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (180 aa)
FIBRA_08533PPIase cyclophilin-type domain-containing protein. (512 aa)
FIBRA_08668WD_REPEATS_REGION domain-containing protein. (456 aa)
FIBRA_00673CPSF_A domain-containing protein. (1212 aa)
FIBRA_01619RRM domain-containing protein. (496 aa)
FIBRA_01640Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (188 aa)
FIBRA_02088C2H2-type domain-containing protein. (227 aa)
FIBRA_02468Uncharacterized protein. (294 aa)
FIBRA_02585Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (152 aa)
FIBRA_03437Uncharacterized protein. (790 aa)
FIBRA_03483Sm domain-containing protein. (107 aa)
FIBRA_03545Slu7 domain-containing protein. (560 aa)
FIBRA_03729zf-C2HC5 domain-containing protein. (294 aa)
FIBRA_03879WD_REPEATS_REGION domain-containing protein. (1343 aa)
FIBRA_03952Uncharacterized protein. (1083 aa)
FIBRA_04163Uncharacterized protein. (347 aa)
FIBRA_04451Uncharacterized protein. (1408 aa)
FIBRA_04514Uncharacterized protein. (423 aa)
FIBRA_04884Uncharacterized protein. (880 aa)
FIBRA_04889Uncharacterized protein. (737 aa)
FIBRA_05000Uncharacterized protein. (783 aa)
FIBRA_05046Uncharacterized protein. (993 aa)
FIBRA_05758Uncharacterized protein. (363 aa)
FIBRA_05918Uncharacterized protein. (556 aa)
FIBRA_06467Uncharacterized protein. (436 aa)
FIBRA_06898Uncharacterized protein. (328 aa)
FIBRA_06909Uncharacterized protein. (351 aa)
FIBRA_07024Uncharacterized protein. (1338 aa)
FIBRA_07029Uncharacterized protein. (1002 aa)
FIBRA_07034DUF1793 domain-containing protein. (431 aa)
FIBRA_07049DUF1793 domain-containing protein. (411 aa)
FIBRA_07277GH16 domain-containing protein. (329 aa)
FIBRA_07845Uncharacterized protein. (289 aa)
FIBRA_08067Uncharacterized protein. (564 aa)
FIBRA_08343Uncharacterized protein. (839 aa)
FIBRA_08439Uncharacterized protein. (110 aa)
FIBRA_08532SF3b1 domain-containing protein. (1143 aa)
FIBRA_00256Uncharacterized protein. (680 aa)
FIBRA_00261WD_REPEATS_REGION domain-containing protein. (351 aa)
FIBRA_09424Uncharacterized protein. (1424 aa)
FIBRA_00089Uncharacterized protein. (495 aa)
FIBRA_00134Uncharacterized protein. (1284 aa)
FIBRA_00298Uncharacterized protein. (531 aa)
FIBRA_00045Uncharacterized protein. (2256 aa)
FIBRA_00135Uncharacterized protein. (1158 aa)
FIBRA_00047Uncharacterized protein. (271 aa)
FIBRA_00282Xpo1 domain-containing protein. (898 aa)
FIBRA_09208WD_REPEATS_REGION domain-containing protein. (861 aa)
Your Current Organism:
Fibroporia radiculosa
NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa
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