(43 nodes) Mixed, incl. Clathrin binding, and Dynamin-type guanine nucleotide-binding (G) domain network (Fibroporia radiculosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_05992	Uncharacterized protein. (1276 aa)
	FIBRA_07228	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (698 aa)
	FIBRA_07423	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (267 aa)
	FIBRA_08279	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (754 aa)
	FIBRA_08689	Adaptin_N domain-containing protein. (787 aa)
	FIBRA_01839	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (723 aa)
	FIBRA_02514	Adaptin_N domain-containing protein. (779 aa)
	FIBRA_02795	ENTH domain-containing protein. (950 aa)
	FIBRA_03324	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (743 aa)
	FIBRA_03847	Uncharacterized protein. (235 aa)
	FIBRA_05989	Uncharacterized protein. (899 aa)
	FIBRA_06630	Uncharacterized protein. (1004 aa)
	FIBRA_07601	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs; Belongs to the dus family. Dus3 subfamily. (1037 aa)
	FIBRA_07802	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	FIBRA_08163	Uncharacterized protein. (211 aa)
	FIBRA_08531	AP-1 complex subunit gamma. (788 aa)
	FIBRA_08702	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (624 aa)
	FIBRA_00559	GH16 domain-containing protein. (194 aa)
	FIBRA_00967	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (940 aa)
	FIBRA_01138	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (703 aa)
	FIBRA_02502	UBA domain-containing protein. (899 aa)
	FIBRA_05306	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (140 aa)
	FIBRA_07776	SAC domain-containing protein. (1002 aa)
	FIBRA_01550	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (162 aa)
	FIBRA_02287	Mitochondrial fission 1 protein; Has a role in mitochondrial fission. (155 aa)
	FIBRA_02417	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1687 aa)
	FIBRA_03045	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (852 aa)
	FIBRA_03688	Clat_adaptor_s domain-containing protein. (806 aa)
	FIBRA_05207	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (928 aa)
	FIBRA_05971	ENTH domain-containing protein. (475 aa)
	FIBRA_02249	GED domain-containing protein. (697 aa)
	FIBRA_02678	Uncharacterized protein. (793 aa)
	FIBRA_03330	WD_REPEATS_REGION domain-containing protein. (752 aa)
	FIBRA_03745	Uncharacterized protein. (681 aa)
	FIBRA_05765	DUF1681 domain-containing protein. (209 aa)
	FIBRA_05887	ENTH domain-containing protein. (595 aa)
	FIBRA_06178	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (430 aa)
	FIBRA_09015	Uncharacterized protein. (238 aa)
	FIBRA_00138	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane. (911 aa)
	FIBRA_00228	GH16 domain-containing protein. (375 aa)
	FIBRA_00318	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (898 aa)
	FIBRA_00150	Protein kinase domain-containing protein. (1437 aa)
	FIBRA_00363	GED domain-containing protein. (817 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00138	FIBRA_00150	J7S5P8	J7SBV8	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Protein kinase domain-containing protein.	0.796
FIBRA_00138	FIBRA_00228	J7S5P8	J7S5U7	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	GH16 domain-containing protein.	0.561
FIBRA_00138	FIBRA_00318	J7S5P8	J7S5Z6	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.583
FIBRA_00138	FIBRA_00363	J7S5P8	J7SCS1	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	GED domain-containing protein.	0.583
FIBRA_00138	FIBRA_00559	J7S5P8	J4H083	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	GH16 domain-containing protein.	0.561
FIBRA_00138	FIBRA_00967	J7S5P8	J4H0U5	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.531
FIBRA_00138	FIBRA_01138	J7S5P8	J4H0X8	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.925
FIBRA_00138	FIBRA_01550	J7S5P8	J4HTI4	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.964
FIBRA_00138	FIBRA_01839	J7S5P8	J4GLI3	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.925
FIBRA_00138	FIBRA_02249	J7S5P8	J4I8Y5	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	GED domain-containing protein.	0.583
FIBRA_00138	FIBRA_02417	J7S5P8	J4HUX3	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.903
FIBRA_00138	FIBRA_02502	J7S5P8	J4H1W2	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	UBA domain-containing protein.	0.844
FIBRA_00138	FIBRA_02678	J7S5P8	J4I969	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Uncharacterized protein.	0.696
FIBRA_00138	FIBRA_02795	J7S5P8	J4GN46	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	ENTH domain-containing protein.	0.840
FIBRA_00138	FIBRA_03045	J7S5P8	J4HVS0	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.583
FIBRA_00138	FIBRA_03324	J7S5P8	J4GNF0	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.583
FIBRA_00138	FIBRA_03688	J7S5P8	J4HW46	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Clat_adaptor_s domain-containing protein.	0.994
FIBRA_00138	FIBRA_03745	J7S5P8	J4I9S7	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Uncharacterized protein.	0.654
FIBRA_00138	FIBRA_03847	J7S5P8	J4GNQ1	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Uncharacterized protein.	0.583
FIBRA_00138	FIBRA_05207	J7S5P8	J4HX48	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.583