34 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_05004	Uncharacterized protein. (636 aa)
	FIBRA_05674	Uncharacterized protein. (291 aa)
	FIBRA_06609	Uncharacterized protein. (92 aa)
	FIBRA_00987	Uncharacterized protein. (682 aa)
	FIBRA_02359	Spc7 domain-containing protein. (1366 aa)
	FIBRA_03950	Protein kinase domain-containing protein. (1201 aa)
	FIBRA_04548	PAT1 domain-containing protein. (959 aa)
	FIBRA_05673	Uncharacterized protein. (212 aa)
	FIBRA_06939	Uncharacterized protein. (275 aa)
	FIBRA_07342	C2H2-type domain-containing protein. (418 aa)
	FIBRA_08090	WD_REPEATS_REGION domain-containing protein. (299 aa)
	FIBRA_08368	Uncharacterized protein. (77 aa)
	FIBRA_03874	TPR_REGION domain-containing protein. (136 aa)
	FIBRA_00608	Uncharacterized protein. (378 aa)
	FIBRA_03812	Uncharacterized protein. (194 aa)
	FIBRA_04456	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (723 aa)
	FIBRA_04643	Dsl1_C domain-containing protein. (920 aa)
	FIBRA_07410	HORMA domain-containing protein. (209 aa)
	FIBRA_07808	Uncharacterized protein. (649 aa)
	FIBRA_07886	Uncharacterized protein. (674 aa)
	FIBRA_08222	Serine/threonine-protein kinase. (823 aa)
	FIBRA_08640	DHR10 domain-containing protein. (438 aa)
	FIBRA_08703	CENP-C_C domain-containing protein. (649 aa)
	FIBRA_09069	Uncharacterized protein. (596 aa)
	FIBRA_00059	Uncharacterized protein. (703 aa)
	FIBRA_02236	Uncharacterized protein. (677 aa)
	FIBRA_03449	Uncharacterized protein. (1136 aa)
	FIBRA_01153	Uncharacterized protein. (2885 aa)
	FIBRA_03757	DUF4187 domain-containing protein. (353 aa)
	FIBRA_06991	Uncharacterized protein. (248 aa)
	FIBRA_07965	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (449 aa)
	FIBRA_01628	BUB1 N-terminal domain-containing protein. (456 aa)
	FIBRA_02440	Spindle pole body component. (966 aa)
	FIBRA_04967	Uncharacterized protein. (136 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00059	FIBRA_03812	J7RUS0	J4I9U0	Uncharacterized protein.	Uncharacterized protein.	0.880
FIBRA_00059	FIBRA_04967	J7RUS0	J4GQ57	Uncharacterized protein.	Uncharacterized protein.	0.431
FIBRA_00059	FIBRA_05004	J7RUS0	J4GQ85	Uncharacterized protein.	Uncharacterized protein.	0.619
FIBRA_00059	FIBRA_06609	J7RUS0	J4GT25	Uncharacterized protein.	Uncharacterized protein.	0.953
FIBRA_00059	FIBRA_06939	J7RUS0	J4H4C4	Uncharacterized protein.	Uncharacterized protein.	0.946
FIBRA_00059	FIBRA_07965	J7RUS0	J4GG22	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.414
FIBRA_00059	FIBRA_08368	J7RUS0	J4H549	Uncharacterized protein.	Uncharacterized protein.	0.800
FIBRA_00987	FIBRA_01628	J4H0U9	J4GKU2	Uncharacterized protein.	BUB1 N-terminal domain-containing protein.	0.670
FIBRA_00987	FIBRA_03449	J4H0U9	J4G5J4	Uncharacterized protein.	Uncharacterized protein.	0.670
FIBRA_00987	FIBRA_07410	J4H0U9	J4IBT1	Uncharacterized protein.	HORMA domain-containing protein.	0.657
FIBRA_00987	FIBRA_07965	J4H0U9	J4GG22	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.579
FIBRA_00987	FIBRA_08090	J4H0U9	J4H4Z6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.704
FIBRA_00987	FIBRA_08222	J4H0U9	J4IC87	Uncharacterized protein.	Serine/threonine-protein kinase.	0.717
FIBRA_01153	FIBRA_01628	J4G0U0	J4GKU2	Uncharacterized protein.	BUB1 N-terminal domain-containing protein.	0.852
FIBRA_01153	FIBRA_02236	J4G0U0	J4G1F8	Uncharacterized protein.	Uncharacterized protein.	0.617
FIBRA_01153	FIBRA_02359	J4G0U0	J4H1T4	Uncharacterized protein.	Spc7 domain-containing protein.	0.491
FIBRA_01153	FIBRA_03449	J4G0U0	J4G5J4	Uncharacterized protein.	Uncharacterized protein.	0.852
FIBRA_01153	FIBRA_04643	J4G0U0	J4IA99	Uncharacterized protein.	Dsl1_C domain-containing protein.	0.447
FIBRA_01153	FIBRA_04967	J4G0U0	J4GQ57	Uncharacterized protein.	Uncharacterized protein.	0.696
FIBRA_01153	FIBRA_05004	J4G0U0	J4GQ85	Uncharacterized protein.	Uncharacterized protein.	0.967