54 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_02513	Rab-GAP TBC domain-containing protein. (316 aa)
	FIBRA_02359	Spc7 domain-containing protein. (1366 aa)
	FIBRA_02029	Peptide hydrolase; Belongs to the peptidase M28 family. (1503 aa)
	FIBRA_01627	WD_REPEATS_REGION domain-containing protein. (597 aa)
	FIBRA_01108	zf-4CXXC_R1 domain-containing protein. (776 aa)
	FIBRA_07616	Uncharacterized protein. (562 aa)
	FIBRA_06665	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (484 aa)
	FIBRA_03268	Uncharacterized protein. (401 aa)
	FIBRA_02320	Serine/threonine-protein phosphatase. (317 aa)
	FIBRA_01628	BUB1 N-terminal domain-containing protein. (456 aa)
	FIBRA_00612	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2927 aa)
	FIBRA_06996	MRC1 domain-containing protein. (1386 aa)
	FIBRA_03950	Protein kinase domain-containing protein. (1201 aa)
	FIBRA_05488	SMK-1 domain-containing protein. (992 aa)
	FIBRA_05602	Uncharacterized protein. (708 aa)
	FIBRA_01952	Checkpoint protein; Belongs to the HUS1 family. (276 aa)
	FIBRA_06843	Uncharacterized protein. (166 aa)
	FIBRA_06849	Uncharacterized protein. (636 aa)
	FIBRA_07342	C2H2-type domain-containing protein. (418 aa)
	FIBRA_07528	Uncharacterized protein. (1578 aa)
	FIBRA_08090	WD_REPEATS_REGION domain-containing protein. (299 aa)
	FIBRA_00511	Uncharacterized protein; Belongs to the protein kinase superfamily. (396 aa)
	FIBRA_00210	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (332 aa)
	FIBRA_00194	Uncharacterized protein. (651 aa)
	FIBRA_07886	Uncharacterized protein. (674 aa)
	FIBRA_07808	Uncharacterized protein. (649 aa)
	FIBRA_07712	Uncharacterized protein. (1165 aa)
	FIBRA_07410	HORMA domain-containing protein. (209 aa)
	FIBRA_06372	Uncharacterized protein. (611 aa)
	FIBRA_04643	Dsl1_C domain-containing protein. (920 aa)
	FIBRA_04456	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (723 aa)
	FIBRA_04054	Uncharacterized protein. (605 aa)
	FIBRA_03868	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (473 aa)
	FIBRA_02441	AAA domain-containing protein. (673 aa)
	FIBRA_01464	Uncharacterized protein. (1056 aa)
	FIBRA_00613	Uncharacterized protein. (557 aa)
	FIBRA_08821	Uncharacterized protein. (543 aa)
	FIBRA_08025	Uncharacterized protein. (359 aa)
	FIBRA_07521	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (473 aa)
	FIBRA_06888	Uncharacterized protein. (287 aa)
	FIBRA_06806	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (441 aa)
	FIBRA_04414	Protein kinase domain-containing protein. (667 aa)
	FIBRA_02302	Protein kinase domain-containing protein. (1261 aa)
	FIBRA_02032	HORMA domain-containing protein. (786 aa)
	FIBRA_01001	Uncharacterized protein. (875 aa)
	FIBRA_02236	Uncharacterized protein. (677 aa)
	FIBRA_02251	Structural maintenance of chromosomes protein. (1204 aa)
	FIBRA_02985	RNA-dependent RNA polymerase. (1215 aa)
	FIBRA_03061	WD_REPEATS_REGION domain-containing protein. (565 aa)
	FIBRA_03449	Uncharacterized protein. (1136 aa)
	FIBRA_03479	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones. (686 aa)
	FIBRA_04950	AAA domain-containing protein; Belongs to the AAA ATPase family. (516 aa)
	FIBRA_04965	AAA domain-containing protein. (371 aa)
	FIBRA_06759	RNA-dependent RNA polymerase. (1258 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00194	FIBRA_00210	J7RV49	J7SBX8	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.621
FIBRA_00194	FIBRA_00511	J7RV49	J4HRQ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.450
FIBRA_00194	FIBRA_00612	J7RV49	J4GI63	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.970
FIBRA_00194	FIBRA_00613	J7RV49	J4I813	Uncharacterized protein.	Uncharacterized protein.	0.777
FIBRA_00194	FIBRA_01108	J7RV49	J4H0X2	Uncharacterized protein.	zf-4CXXC_R1 domain-containing protein.	0.720
FIBRA_00194	FIBRA_01952	J7RV49	J4HU55	Uncharacterized protein.	Checkpoint protein; Belongs to the HUS1 family.	0.532
FIBRA_00194	FIBRA_02251	J7RV49	J4G1G7	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.428
FIBRA_00194	FIBRA_02302	J7RV49	J4HUP5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.972
FIBRA_00194	FIBRA_02320	J7RV49	J4GMS9	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.842
FIBRA_00194	FIBRA_02441	J7RV49	J4I923	Uncharacterized protein.	AAA domain-containing protein.	0.681
FIBRA_00194	FIBRA_03868	J7RV49	J4I9V1	Uncharacterized protein.	Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.948
FIBRA_00194	FIBRA_03950	J7RV49	J4H2P4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.415
FIBRA_00194	FIBRA_04414	J7RV49	J4HWI5	Uncharacterized protein.	Protein kinase domain-containing protein.	0.988
FIBRA_00194	FIBRA_04965	J7RV49	J4G889	Uncharacterized protein.	AAA domain-containing protein.	0.591
FIBRA_00194	FIBRA_05488	J7RV49	J4H3J2	Uncharacterized protein.	SMK-1 domain-containing protein.	0.775
FIBRA_00194	FIBRA_05602	J7RV49	J4H3L8	Uncharacterized protein.	Uncharacterized protein.	0.793
FIBRA_00194	FIBRA_06665	J7RV49	J4GT71	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.457
FIBRA_00194	FIBRA_06806	J7RV49	J4HZP1	Uncharacterized protein.	Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.762
FIBRA_00194	FIBRA_06843	J7RV49	J4H4A6	Uncharacterized protein.	Uncharacterized protein.	0.497
FIBRA_00194	FIBRA_06849	J7RV49	J4H4A7	Uncharacterized protein.	Uncharacterized protein.	0.497