STRINGSTRING
FIBRA_07528 FIBRA_07528 FIBRA_00600 FIBRA_00600 FIBRA_01381 FIBRA_01381 FIBRA_01556 FIBRA_01556 FIBRA_01663 FIBRA_01663 FIBRA_02753 FIBRA_02753 FIBRA_03061 FIBRA_03061 PAN2 PAN2 FIBRA_07759 FIBRA_07759 FIBRA_07831 FIBRA_07831 FIBRA_00805 FIBRA_00805 FIBRA_01155 FIBRA_01155 FIBRA_01316 FIBRA_01316 FIBRA_03043 FIBRA_03043 FIBRA_06204 FIBRA_06204 FIBRA_07574 FIBRA_07574 FIBRA_07616 FIBRA_07616 FIBRA_08174 FIBRA_08174 FIBRA_09111 FIBRA_09111 FIBRA_01700 FIBRA_01700 FIBRA_02846 FIBRA_02846 FIBRA_03172 FIBRA_03172 LSM1 LSM1 FIBRA_04232 FIBRA_04232 FIBRA_04548 FIBRA_04548 FIBRA_04672 FIBRA_04672 PAN3 PAN3 FIBRA_06624 FIBRA_06624 FIBRA_06770 FIBRA_06770 FIBRA_07812 FIBRA_07812 FIBRA_08002 FIBRA_08002 FIBRA_01182 FIBRA_01182 FIBRA_02332 FIBRA_02332 FIBRA_03366 FIBRA_03366 FIBRA_03521 FIBRA_03521 FIBRA_04462 FIBRA_04462 FIBRA_05981 FIBRA_05981 FIBRA_01424 FIBRA_01424 FIBRA_02678 FIBRA_02678 FIBRA_03504 FIBRA_03504 FIBRA_04276 FIBRA_04276 FIBRA_05687 FIBRA_05687 FIBRA_06413 FIBRA_06413 FIBRA_06605 FIBRA_06605 FIBRA_08118 FIBRA_08118 FIBRA_00178 FIBRA_00178
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FIBRA_07528Uncharacterized protein. (1578 aa)
FIBRA_00600RPOL4c domain-containing protein. (153 aa)
FIBRA_01381Endo/exonuclease/phosphatase domain-containing protein. (316 aa)
FIBRA_01556Nudix hydrolase domain-containing protein. (746 aa)
FIBRA_01663Endo/exonuclease/phosphatase domain-containing protein. (1268 aa)
FIBRA_02753WD_REPEATS_REGION domain-containing protein. (589 aa)
FIBRA_03061WD_REPEATS_REGION domain-containing protein. (565 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1139 aa)
FIBRA_07759Uncharacterized protein. (286 aa)
FIBRA_07831HRDC domain-containing protein. (751 aa)
FIBRA_00805Uncharacterized protein. (1445 aa)
FIBRA_01155Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (302 aa)
FIBRA_01316Uncharacterized protein. (173 aa)
FIBRA_03043SAM domain-containing protein. (649 aa)
FIBRA_06204Tr-type G domain-containing protein. (588 aa)
FIBRA_07574Uncharacterized protein. (731 aa)
FIBRA_07616Uncharacterized protein. (562 aa)
FIBRA_08174Uncharacterized protein. (348 aa)
FIBRA_09111Uncharacterized protein. (349 aa)
FIBRA_01700Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (368 aa)
FIBRA_02846Uncharacterized protein. (208 aa)
FIBRA_03172WD_REPEATS_REGION domain-containing protein. (312 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (116 aa)
FIBRA_04232RNase_PH domain-containing protein. (291 aa)
FIBRA_04548PAT1 domain-containing protein. (959 aa)
FIBRA_04672Uncharacterized protein. (308 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (1522 aa)
FIBRA_06624PX domain-containing protein. (493 aa)
FIBRA_06770Uncharacterized protein. (608 aa)
FIBRA_07812Uncharacterized protein. (170 aa)
FIBRA_08002Uncharacterized protein. (359 aa)
FIBRA_01182Uncharacterized protein. (757 aa)
FIBRA_02332Uncharacterized protein. (283 aa)
FIBRA_03366PUM-HD domain-containing protein. (1053 aa)
FIBRA_03521GTP_EFTU_D2 domain-containing protein. (565 aa)
FIBRA_04462PUM-HD domain-containing protein. (845 aa)
FIBRA_05981Uncharacterized protein. (2114 aa)
FIBRA_01424Fe2OG dioxygenase domain-containing protein. (644 aa)
FIBRA_02678Uncharacterized protein. (793 aa)
FIBRA_03504PUM-HD domain-containing protein. (659 aa)
FIBRA_04276RBR-type E3 ubiquitin transferase. (475 aa)
FIBRA_05687Uncharacterized protein. (230 aa)
FIBRA_06413NTP_transf_9 domain-containing protein. (242 aa)
FIBRA_06605YTH domain-containing protein. (809 aa)
FIBRA_08118DEP domain-containing protein. (1549 aa)
FIBRA_00178RBR-type E3 ubiquitin transferase. (424 aa)
Your Current Organism:
Fibroporia radiculosa
NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa
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