17 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_05473	UBIQUITIN_CONJUGAT_2 domain-containing protein. (900 aa)
	FIBRA_04867	Uncharacterized protein. (705 aa)
	FIBRA_03192	Uncharacterized protein. (52 aa)
	FIBRA_00941	Uncharacterized protein. (677 aa)
	FIBRA_05034	Uncharacterized protein. (777 aa)
	FIBRA_08570	HMG box domain-containing protein. (447 aa)
	FIBRA_05751	Uncharacterized protein. (518 aa)
	FIBRA_04026	PHD-type domain-containing protein. (1312 aa)
	FIBRA_01253	Uncharacterized protein. (186 aa)
	FIBRA_01529	SLD3 domain-containing protein. (574 aa)
	FIBRA_03290	Protein kinase domain-containing protein. (532 aa)
	FIBRA_07232	Uncharacterized protein. (155 aa)
	FIBRA_05483	Uncharacterized protein. (1227 aa)
	FIBRA_00140	UBIQUITIN_CONJUGAT_2 domain-containing protein. (462 aa)
	FIBRA_00017	Homeobox domain-containing protein. (523 aa)
	FIBRA_07231	Uncharacterized protein. (200 aa)
	FIBRA_05263	Homeobox domain-containing protein. (632 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00140	FIBRA_01529	J7SBV3	J4I8J3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	SLD3 domain-containing protein.	0.579
FIBRA_00140	FIBRA_05473	J7SBV3	J4H3I9	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.911
FIBRA_01529	FIBRA_00140	J4I8J3	J7SBV3	SLD3 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.579
FIBRA_01529	FIBRA_05473	J4I8J3	J4H3I9	SLD3 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.579
FIBRA_04026	FIBRA_08570	J4G6R0	J4GHQ8	PHD-type domain-containing protein.	HMG box domain-containing protein.	0.439
FIBRA_05473	FIBRA_00140	J4H3I9	J7SBV3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.911
FIBRA_05473	FIBRA_01529	J4H3I9	J4I8J3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	SLD3 domain-containing protein.	0.579
FIBRA_07231	FIBRA_07232	J4IBP7	J4I0C7	Uncharacterized protein.	Uncharacterized protein.	0.855
FIBRA_07232	FIBRA_07231	J4I0C7	J4IBP7	Uncharacterized protein.	Uncharacterized protein.	0.855
FIBRA_08570	FIBRA_04026	J4GHQ8	J4G6R0	HMG box domain-containing protein.	PHD-type domain-containing protein.	0.439