5 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_05473	UBIQUITIN_CONJUGAT_2 domain-containing protein. (900 aa)
	FIBRA_00140	UBIQUITIN_CONJUGAT_2 domain-containing protein. (462 aa)
	FIBRA_00070	PA28_beta domain-containing protein. (252 aa)
	FIBRA_00099	Uncharacterized protein; Belongs to the BI1 family. (329 aa)
	FIBRA_02469	Uncharacterized protein. (507 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00070	FIBRA_00140	J7SBS3	J7SBV3	PA28_beta domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.699
FIBRA_00070	FIBRA_05473	J7SBS3	J4H3I9	PA28_beta domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.699
FIBRA_00140	FIBRA_00070	J7SBV3	J7SBS3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	PA28_beta domain-containing protein.	0.699
FIBRA_00140	FIBRA_05473	J7SBV3	J4H3I9	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.911
FIBRA_05473	FIBRA_00070	J4H3I9	J7SBS3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	PA28_beta domain-containing protein.	0.699
FIBRA_05473	FIBRA_00140	J4H3I9	J7SBV3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.911