30 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_05770	Uncharacterized protein. (110 aa)
	FIBRA_03065	Uncharacterized protein. (434 aa)
	FIBRA_04392	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (462 aa)
	FIBRA_05750	ACB domain-containing protein. (113 aa)
	FIBRA_06236	Uncharacterized protein. (650 aa)
	FIBRA_05882	FMN hydroxy acid dehydrogenase domain-containing protein. (535 aa)
	FIBRA_08805	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (415 aa)
	FIBRA_05206	SCP2 domain-containing protein. (129 aa)
	FIBRA_04029	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (410 aa)
	FIBRA_02815	ABC transporter domain-containing protein. (753 aa)
	FIBRA_05234	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (435 aa)
	FIBRA_05472	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)
	FIBRA_07120	Carn_acyltransf domain-containing protein. (627 aa)
	FIBRA_00725	Uncharacterized protein. (493 aa)
	FIBRA_02450	Uncharacterized protein. (301 aa)
	FIBRA_03238	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (517 aa)
	FIBRA_03344	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (492 aa)
	FIBRA_03711	Uncharacterized protein. (321 aa)
	FIBRA_04126	FMN hydroxy acid dehydrogenase domain-containing protein. (442 aa)
	FIBRA_05824	Uncharacterized protein. (317 aa)
	FIBRA_06382	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (463 aa)
	FIBRA_06440	Uncharacterized protein. (290 aa)
	FIBRA_06471	MaoC-like domain-containing protein. (898 aa)
	FIBRA_08034	Uncharacterized protein. (558 aa)
	FIBRA_08374	Uncharacterized protein. (427 aa)
	FIBRA_02349	ABC transporter domain-containing protein. (560 aa)
	FIBRA_05069	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (324 aa)
	FIBRA_05499	Uncharacterized protein. (411 aa)
	FIBRA_06259	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (667 aa)
	FIBRA_01303	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (302 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00725	FIBRA_03344	J4GIF9	J4GNF4	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.770
FIBRA_00725	FIBRA_04029	J4GIF9	J4I9Y2	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.470
FIBRA_00725	FIBRA_05206	J4GIF9	J4IAK8	Uncharacterized protein.	SCP2 domain-containing protein.	0.628
FIBRA_00725	FIBRA_05234	J4GIF9	J4G8V4	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.470
FIBRA_00725	FIBRA_06236	J4GIF9	J4HYT0	Uncharacterized protein.	Uncharacterized protein.	0.497
FIBRA_00725	FIBRA_06259	J4GIF9	J4H3Z4	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.664
FIBRA_00725	FIBRA_06471	J4GIF9	J4GST2	Uncharacterized protein.	MaoC-like domain-containing protein.	0.628
FIBRA_00725	FIBRA_08034	J4GIF9	J4GW27	Uncharacterized protein.	Uncharacterized protein.	0.497
FIBRA_00725	FIBRA_08805	J4GIF9	J4I3C7	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.470
FIBRA_01303	FIBRA_02349	J4HT35	J4H1T2	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ABC transporter domain-containing protein.	0.688
FIBRA_01303	FIBRA_02815	J4HT35	J4G2V7	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ABC transporter domain-containing protein.	0.673
FIBRA_01303	FIBRA_03238	J4HT35	J4GND3	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.604
FIBRA_01303	FIBRA_04392	J4HT35	J4HWI1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.604
FIBRA_01303	FIBRA_05069	J4HT35	J4H3A9	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.736
FIBRA_01303	FIBRA_05472	J4HT35	J4G9I4	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.770
FIBRA_01303	FIBRA_06382	J4HT35	J4GSM8	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.604
FIBRA_02349	FIBRA_01303	J4H1T2	J4HT35	ABC transporter domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.688
FIBRA_02349	FIBRA_02815	J4H1T2	J4G2V7	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.880
FIBRA_02349	FIBRA_03238	J4H1T2	J4GND3	ABC transporter domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.653
FIBRA_02349	FIBRA_03344	J4H1T2	J4GNF4	ABC transporter domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.699