41 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_05632	Uncharacterized protein. (153 aa)
	FIBRA_03696	Uncharacterized protein. (2146 aa)
	FIBRA_07028	Uncharacterized protein. (344 aa)
	FIBRA_08654	Uncharacterized protein. (326 aa)
	FIBRA_01873	Ubiquitin carboxyl-terminal hydrolase. (322 aa)
	FIBRA_01919	YL1_C domain-containing protein. (132 aa)
	FIBRA_02593	Uncharacterized protein. (268 aa)
	FIBRA_03318	Uncharacterized protein. (141 aa)
	FIBRA_03940	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (187 aa)
	FIBRA_03955	Uncharacterized protein. (622 aa)
	FIBRA_05375	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (474 aa)
	FIBRA_02592	Uncharacterized protein. (294 aa)
	FIBRA_02675	Ubiquitin-like domain-containing protein. (283 aa)
	FIBRA_04645	Ubiquitin-like domain-containing protein. (159 aa)
	FIBRA_00476	Uncharacterized protein. (452 aa)
	FIBRA_01218	Uncharacterized protein. (152 aa)
	FIBRA_03263	Uncharacterized protein. (1356 aa)
	FIBRA_01900	Uncharacterized protein. (312 aa)
	FIBRA_02315	NmrA domain-containing protein. (342 aa)
	FIBRA_01371	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (143 aa)
	FIBRA_01546	Proteasome subunit beta. (252 aa)
	FIBRA_00070	PA28_beta domain-containing protein. (252 aa)
	FIBRA_08760	Uncharacterized protein. (314 aa)
	FIBRA_07742	Ubiquitin-like domain-containing protein. (77 aa)
	FIBRA_06492	ANK_REP_REGION domain-containing protein. (252 aa)
	FIBRA_06372	Uncharacterized protein. (611 aa)
	FIBRA_06308	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (202 aa)
	FIBRA_05775	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (153 aa)
	FIBRA_05749	Uncharacterized protein. (1016 aa)
	FIBRA_03209	Uncharacterized protein. (275 aa)
	FIBRA_02942	Uncharacterized protein. (1645 aa)
	FIBRA_06389	Uncharacterized protein. (587 aa)
	FIBRA_05548	Uncharacterized protein. (342 aa)
	FIBRA_03703	Uncharacterized protein. (2475 aa)
	FIBRA_03473	Uncharacterized protein; Belongs to the actin family. (729 aa)
	FIBRA_03030	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (156 aa)
	FIBRA_02623	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (764 aa)
	FIBRA_02495	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (158 aa)
	FIBRA_01693	UCH_1 domain-containing protein. (262 aa)
	FIBRA_06391	SHSP domain-containing protein. (484 aa)
	FIBRA_05633	RPN13_C domain-containing protein. (119 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00070	FIBRA_00476	J7SBS3	J4G0A4	PA28_beta domain-containing protein.	Uncharacterized protein.	0.706
FIBRA_00070	FIBRA_01218	J7SBS3	J4G0V3	PA28_beta domain-containing protein.	Uncharacterized protein.	0.617
FIBRA_00070	FIBRA_01546	J7SBS3	J4G118	PA28_beta domain-containing protein.	Proteasome subunit beta.	0.975
FIBRA_00070	FIBRA_01693	J7SBS3	J4HTR1	PA28_beta domain-containing protein.	UCH_1 domain-containing protein.	0.659
FIBRA_00070	FIBRA_01873	J7SBS3	J4H1I0	PA28_beta domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.706
FIBRA_00070	FIBRA_01900	J7SBS3	J4GLR5	PA28_beta domain-containing protein.	Uncharacterized protein.	0.704
FIBRA_00070	FIBRA_02315	J7SBS3	J4GMS8	PA28_beta domain-containing protein.	NmrA domain-containing protein.	0.648
FIBRA_00070	FIBRA_02675	J7SBS3	J4G2A3	PA28_beta domain-containing protein.	Ubiquitin-like domain-containing protein.	0.679
FIBRA_00070	FIBRA_03209	J7SBS3	J4I9H3	PA28_beta domain-containing protein.	Uncharacterized protein.	0.630
FIBRA_00070	FIBRA_03263	J7SBS3	J4GND8	PA28_beta domain-containing protein.	Uncharacterized protein.	0.904
FIBRA_00070	FIBRA_04645	J7SBS3	J4G7Q1	PA28_beta domain-containing protein.	Ubiquitin-like domain-containing protein.	0.681
FIBRA_00070	FIBRA_05632	J7SBS3	J4G9U7	PA28_beta domain-containing protein.	Uncharacterized protein.	0.805
FIBRA_00070	FIBRA_05633	J7SBS3	J4H3M4	PA28_beta domain-containing protein.	RPN13_C domain-containing protein.	0.805
FIBRA_00070	FIBRA_06372	J7SBS3	J4IB82	PA28_beta domain-containing protein.	Uncharacterized protein.	0.765
FIBRA_00070	FIBRA_07028	J7SBS3	J4GU64	PA28_beta domain-containing protein.	Uncharacterized protein.	0.733
FIBRA_00070	FIBRA_07742	J7SBS3	J4IBZ4	PA28_beta domain-containing protein.	Ubiquitin-like domain-containing protein.	0.719
FIBRA_00476	FIBRA_00070	J4G0A4	J7SBS3	Uncharacterized protein.	PA28_beta domain-containing protein.	0.706
FIBRA_00476	FIBRA_01218	J4G0A4	J4G0V3	Uncharacterized protein.	Uncharacterized protein.	0.693
FIBRA_00476	FIBRA_01546	J4G0A4	J4G118	Uncharacterized protein.	Proteasome subunit beta.	0.932
FIBRA_00476	FIBRA_01900	J4G0A4	J4GLR5	Uncharacterized protein.	Uncharacterized protein.	0.884