39 items (Fibroporia radiculosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FIBRA_03964	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1115 aa)
	FIBRA_00600	RPOL4c domain-containing protein. (153 aa)
	FIBRA_03181	Uncharacterized protein. (662 aa)
	FIBRA_03186	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (480 aa)
	FIBRA_07233	Uncharacterized protein. (317 aa)
	FIBRA_03519	RPOLD domain-containing protein. (387 aa)
	FIBRA_05418	RNA_pol_L_2 domain-containing protein. (142 aa)
	FIBRA_04723	GATA-type domain-containing protein. (746 aa)
	FIBRA_04703	Flavin_Reduct domain-containing protein. (225 aa)
	FIBRA_03971	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (830 aa)
	FIBRA_04488	Uncharacterized protein. (596 aa)
	FIBRA_03554	Uncharacterized protein. (123 aa)
	FIBRA_04487	HATPase_c domain-containing protein. (694 aa)
	FIBRA_00871	Rhodanese domain-containing protein. (342 aa)
	FIBRA_07942	GATA-type domain-containing protein. (1271 aa)
	FIBRA_05184	Protein kinase domain-containing protein. (495 aa)
	FIBRA_07321	Protein kinase domain-containing protein. (765 aa)
	FIBRA_07812	Uncharacterized protein. (170 aa)
	FIBRA_08530	Fork-head domain-containing protein. (829 aa)
	FIBRA_00732	Histone H2B; Belongs to the histone H2B family. (148 aa)
	FIBRA_01157	Uncharacterized protein. (422 aa)
	FIBRA_01866	Protein kinase domain-containing protein. (745 aa)
	FIBRA_04515	Histone H2B; Belongs to the histone H2B family. (451 aa)
	FIBRA_04885	Uncharacterized protein. (329 aa)
	FIBRA_05853	RNA_pol_Rpb1_1 domain-containing protein. (173 aa)
	FIBRA_00726	Histone H2B; Belongs to the histone H2B family. (147 aa)
	FIBRA_00836	Amino_oxidase domain-containing protein. (526 aa)
	FIBRA_03555	Serine/threonine-protein phosphatase. (433 aa)
	FIBRA_09211	Uncharacterized protein. (596 aa)
	FIBRA_04489	Uncharacterized protein. (262 aa)
	FIBRA_05852	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1621 aa)
	FIBRA_05990	WD_REPEATS_REGION domain-containing protein. (819 aa)
	FIBRA_06621	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1226 aa)
	FIBRA_06872	Uncharacterized protein; Belongs to the DEAD box helicase family. (755 aa)
	FIBRA_07174	Uncharacterized protein. (207 aa)
	FIBRA_08207	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (98 aa)
	FIBRA_00119	Uncharacterized protein. (170 aa)
	FIBRA_09493	Uncharacterized protein. (143 aa)
	FIBRA_09231	Uncharacterized protein. (307 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00119	FIBRA_00600	J7RUX4	J4G0H0	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
FIBRA_00119	FIBRA_00726	J7RUX4	J4I835	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.892
FIBRA_00119	FIBRA_00732	J7RUX4	J4HS36	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.892
FIBRA_00119	FIBRA_01157	J7RUX4	J4HSV0	Uncharacterized protein.	Uncharacterized protein.	0.685
FIBRA_00119	FIBRA_03181	J7RUX4	J4G4G4	Uncharacterized protein.	Uncharacterized protein.	0.670
FIBRA_00119	FIBRA_03519	J7RUX4	J4GNI8	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
FIBRA_00119	FIBRA_04515	J7RUX4	J4HWK4	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.863
FIBRA_00119	FIBRA_04885	J7RUX4	J4HWS6	Uncharacterized protein.	Uncharacterized protein.	0.984
FIBRA_00119	FIBRA_05418	J7RUX4	J4GQZ1	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
FIBRA_00119	FIBRA_05852	J7RUX4	J4IAY2	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.973
FIBRA_00119	FIBRA_05853	J7RUX4	J4HY78	Uncharacterized protein.	RNA_pol_Rpb1_1 domain-containing protein.	0.973
FIBRA_00119	FIBRA_06621	J7RUX4	J4IBC9	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
FIBRA_00119	FIBRA_06872	J7RUX4	J4IBH8	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.664
FIBRA_00119	FIBRA_07174	J7RUX4	J4IBN6	Uncharacterized protein.	Uncharacterized protein.	0.999
FIBRA_00119	FIBRA_07233	J7RUX4	J4GDW0	Uncharacterized protein.	Uncharacterized protein.	0.985
FIBRA_00119	FIBRA_07321	J7RUX4	J4H4J8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.663
FIBRA_00119	FIBRA_07812	J7RUX4	J4H4U2	Uncharacterized protein.	Uncharacterized protein.	0.999
FIBRA_00119	FIBRA_08207	J7RUX4	J4IC84	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.976
FIBRA_00600	FIBRA_00119	J4G0H0	J7RUX4	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999
FIBRA_00600	FIBRA_00726	J4G0H0	J4I835	RPOL4c domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.903