(30 nodes) Arginine biosynthesis network (Fibroporia radiculosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	FIBRA_07981	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (1049 aa)
	FIBRA_01365	Aspartate aminotransferase. (357 aa)
	FIBRA_02063	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (340 aa)
	FIBRA_03306	N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family. (882 aa)
	FIBRA_03667	Glutamine synthetase. (352 aa)
	FIBRA_06973	M20_dimer domain-containing protein. (599 aa)
	FIBRA_07598	Aminotran_1_2 domain-containing protein. (483 aa)
	FIBRA_00683	Uncharacterized protein. (786 aa)
	FIBRA_05872	AAA domain-containing protein; Belongs to the AAA ATPase family. (353 aa)
	FIBRA_07742	Ubiquitin-like domain-containing protein. (77 aa)
	FIBRA_08154	Uncharacterized protein. (492 aa)
	FIBRA_08906	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (471 aa)
	FIBRA_02773	Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family. (461 aa)
	FIBRA_04016	Aspartate aminotransferase. (423 aa)
	FIBRA_05249	YccV-like domain-containing protein. (635 aa)
	FIBRA_07186	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (838 aa)
	FIBRA_07402	N-acetyltransferase domain-containing protein. (622 aa)
	FIBRA_07583	Uncharacterized protein. (84 aa)
	FIBRA_07738	Uncharacterized protein. (253 aa)
	FIBRA_01363	t-SNARE coiled-coil homology domain-containing protein. (965 aa)
	FIBRA_03013	Amidohydro-rel domain-containing protein. (408 aa)
	FIBRA_05774	Arginase; Belongs to the arginase family. (414 aa)
	FIBRA_06908	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (606 aa)
	FIBRA_01741	M20_dimer domain-containing protein. (598 aa)
	FIBRA_02339	Uncharacterized protein. (906 aa)
	FIBRA_04528	M20_dimer domain-containing protein. (530 aa)
	FIBRA_04606	Uncharacterized protein. (238 aa)
	FIBRA_04692	Uncharacterized protein. (380 aa)
	FIBRA_04921	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (495 aa)
	FIBRA_06833	M20_dimer domain-containing protein. (594 aa)

Your Current Organism:

Fibroporia radiculosa

NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIBRA_00683	FIBRA_01363	J4I827	J4GJY9	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.488
FIBRA_00683	FIBRA_02063	J4I827	J4HUB3	Uncharacterized protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.636
FIBRA_00683	FIBRA_02773	J4I827	J4G2P7	Uncharacterized protein.	Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.	0.614
FIBRA_00683	FIBRA_03306	J4I827	J4HVX2	Uncharacterized protein.	N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.	0.934
FIBRA_00683	FIBRA_04692	J4I827	J4H336	Uncharacterized protein.	Uncharacterized protein.	0.781
FIBRA_00683	FIBRA_04921	J4I827	J4H380	Uncharacterized protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.457
FIBRA_00683	FIBRA_05774	J4I827	J4GRK7	Uncharacterized protein.	Arginase; Belongs to the arginase family.	0.534
FIBRA_00683	FIBRA_07402	J4I827	J4GEC0	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.404
FIBRA_00683	FIBRA_07598	J4I827	J4I0Z6	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.448
FIBRA_01363	FIBRA_00683	J4GJY9	J4I827	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.488
FIBRA_01363	FIBRA_01365	J4GJY9	J4HT76	t-SNARE coiled-coil homology domain-containing protein.	Aspartate aminotransferase.	0.701
FIBRA_01363	FIBRA_01741	J4GJY9	J4H1E4	t-SNARE coiled-coil homology domain-containing protein.	M20_dimer domain-containing protein.	0.488
FIBRA_01363	FIBRA_02063	J4GJY9	J4HUB3	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.812
FIBRA_01363	FIBRA_02339	J4GJY9	J4H1T0	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.645
FIBRA_01363	FIBRA_02773	J4GJY9	J4G2P7	t-SNARE coiled-coil homology domain-containing protein.	Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.	0.977
FIBRA_01363	FIBRA_03306	J4GJY9	J4HVX2	t-SNARE coiled-coil homology domain-containing protein.	N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.	0.994
FIBRA_01363	FIBRA_04016	J4GJY9	J4G6Q5	t-SNARE coiled-coil homology domain-containing protein.	Aspartate aminotransferase.	0.708
FIBRA_01363	FIBRA_04528	J4GJY9	J4H304	t-SNARE coiled-coil homology domain-containing protein.	M20_dimer domain-containing protein.	0.488
FIBRA_01363	FIBRA_04692	J4GJY9	J4H336	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.993
FIBRA_01363	FIBRA_04921	J4GJY9	J4H380	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.931