(37 nodes) Mixed, incl. Pentatricopeptide repeat, and Outer kinetochore network (Penicillium solitum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6QSB5	Uncharacterized protein. (333 aa)
	A0A1V6QSD0	Spindle pole body component. (887 aa)
	A0A1V6QTP3	Uncharacterized protein. (173 aa)
	A0A1V6QUE2	Uncharacterized protein. (439 aa)
	A0A1V6QVG5	Uncharacterized protein. (670 aa)
	A0A1V6QVG7	Uncharacterized protein. (246 aa)
	A0A1V6QX05	Uncharacterized protein. (243 aa)
	A0A1V6QX47	Uncharacterized protein. (179 aa)
	A0A1V6QXG0	PPR_long domain-containing protein. (1263 aa)
	A0A1V6QZJ2	Uncharacterized protein. (535 aa)
	A0A1V6R0Q6	Uncharacterized protein. (820 aa)
	A0A1V6R153	Spindle pole body component. (952 aa)
	A0A1V6R1I4	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (485 aa)
	A0A1V6R402	Uncharacterized protein. (160 aa)
	A0A1V6R4D6	Uncharacterized protein. (800 aa)
	A0A1V6R4G4	Uncharacterized protein. (79 aa)
	A0A1V6R4M0	Uncharacterized protein. (136 aa)
	A0A1V6R4W6	PseudoU_synth_1 domain-containing protein. (616 aa)
	A0A1V6R6B6	Uncharacterized protein. (853 aa)
	A0A1V6R6T9	Uncharacterized protein. (289 aa)
	A0A1V6R8Y0	Uncharacterized protein. (356 aa)
	A0A1V6RAP8	Uncharacterized protein. (634 aa)
	A0A1V6RD52	Glyco_hydro_cc domain-containing protein. (265 aa)
	A0A1V6RDA8	Spindle pole body component. (1032 aa)
	A0A1V6RDF9	Uncharacterized protein. (791 aa)
	A0A1V6RHU8	Spindle pole body component. (878 aa)
	A0A1V6RKB5	Uncharacterized protein. (360 aa)
	A0A1V6RKY6	Uncharacterized protein. (205 aa)
	A0A1V6RLQ6	Uncharacterized protein. (1319 aa)
	A0A1V6RN08	Uncharacterized protein. (546 aa)
	A0A1V6RNU1	Uncharacterized protein. (619 aa)
	A0A1V6RPF9	Tafazzin family protein; Belongs to the taffazin family. (374 aa)
	A0A1V6RPM5	Peroxin/Ferlin domain-containing protein. (1345 aa)
	A0A1V6RQL4	Uncharacterized protein. (116 aa)
	A0A1V6RQV4	Uncharacterized protein. (831 aa)
	A0A1V6RR13	Spindle pole body component. (788 aa)
	A0A1V6RRN9	Uncharacterized protein. (179 aa)

Your Current Organism:

Penicillium solitum

NCBI taxonomy Id: 60172
Other names: ATCC 9923, CBS 288.36, CBS 424.89, FRR 937, IBT 3948, IFO 7765, IMI 039810, IMI 092225, LSHB P52, MUCL 28668, MUCL 29173, NRRL 937, P. solitum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6QSB5	A0A1V6R6T9	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A1V6QSB5	A0A1V6RQV4	Uncharacterized protein.	Uncharacterized protein.	0.412
A0A1V6QSD0	A0A1V6QUE2	Spindle pole body component.	Uncharacterized protein.	0.951
A0A1V6QSD0	A0A1V6QVG5	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6QXG0	Spindle pole body component.	PPR_long domain-containing protein.	0.738
A0A1V6QSD0	A0A1V6R0Q6	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6R153	Spindle pole body component.	Spindle pole body component.	0.986
A0A1V6QSD0	A0A1V6R1I4	Spindle pole body component.	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.	0.997
A0A1V6QSD0	A0A1V6R4D6	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6R4G4	Spindle pole body component.	Uncharacterized protein.	0.985
A0A1V6QSD0	A0A1V6R6B6	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6RDA8	Spindle pole body component.	Spindle pole body component.	0.997
A0A1V6QSD0	A0A1V6RDF9	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6RHU8	Spindle pole body component.	Spindle pole body component.	0.986
A0A1V6QSD0	A0A1V6RKB5	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6RLQ6	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6RNU1	Spindle pole body component.	Uncharacterized protein.	0.738
A0A1V6QSD0	A0A1V6RPM5	Spindle pole body component.	Peroxin/Ferlin domain-containing protein.	0.738
A0A1V6QSD0	A0A1V6RR13	Spindle pole body component.	Spindle pole body component.	0.986
A0A1V6QUE2	A0A1V6QSD0	Uncharacterized protein.	Spindle pole body component.	0.951

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