(24 nodes) AMP-binding enzyme, C-terminal domain network (Penicillium solitum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6R860	Uncharacterized protein. (1238 aa)
	A0A1V6R8C2	Uncharacterized protein. (578 aa)
	A0A1V6QE08	Uncharacterized protein. (558 aa)
	A0A1V6QHB4	Uncharacterized protein. (556 aa)
	A0A1V6R9J8	Uncharacterized protein. (566 aa)
	A0A1V6R9L4	Uncharacterized protein. (547 aa)
	A0A1V6R9W5	Uncharacterized protein. (525 aa)
	A0A1V6RD64	Acetyl-coenzyme A synthetase. (669 aa)
	A0A1V6RHK6	Uncharacterized protein. (617 aa)
	A0A1V6RID4	Uncharacterized protein. (557 aa)
	A0A1V6QTG6	Uncharacterized protein. (595 aa)
	A0A1V6QVI2	Uncharacterized protein. (632 aa)
	A0A1V6QS48	Uncharacterized protein. (560 aa)
	A0A1V6QQC6	Uncharacterized protein. (700 aa)
	A0A1V6QWL5	Uncharacterized protein. (584 aa)
	A0A1V6R189	Uncharacterized protein. (539 aa)
	A0A1V6R1P2	Uncharacterized protein. (558 aa)
	A0A1V6R3W4	Uncharacterized protein. (595 aa)
	A0A1V6QLJ5	Uncharacterized protein. (562 aa)
	A0A1V6RJG9	Uncharacterized protein. (2108 aa)
	A0A1V6RNN2	Uncharacterized protein. (574 aa)
	A0A1V6RQ58	Uncharacterized protein. (610 aa)
	A0A1V6R623	Uncharacterized protein. (564 aa)
	A0A1V6R7Z9	Uncharacterized protein. (572 aa)

Your Current Organism:

Penicillium solitum

NCBI taxonomy Id: 60172
Other names: ATCC 9923, CBS 288.36, CBS 424.89, FRR 937, IBT 3948, IFO 7765, IMI 039810, IMI 092225, LSHB P52, MUCL 28668, MUCL 29173, NRRL 937, P. solitum

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6QE08	A0A1V6QQC6	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QE08	A0A1V6R860	Uncharacterized protein.	Uncharacterized protein.	0.577
A0A1V6QE08	A0A1V6RD64	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.565
A0A1V6QE08	A0A1V6RJG9	Uncharacterized protein.	Uncharacterized protein.	0.549
A0A1V6QHB4	A0A1V6QQC6	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QHB4	A0A1V6R860	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A1V6QHB4	A0A1V6RD64	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.565
A0A1V6QHB4	A0A1V6RJG9	Uncharacterized protein.	Uncharacterized protein.	0.549
A0A1V6QLJ5	A0A1V6QQC6	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QLJ5	A0A1V6R189	Uncharacterized protein.	Uncharacterized protein.	0.879
A0A1V6QLJ5	A0A1V6R860	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A1V6QLJ5	A0A1V6R9L4	Uncharacterized protein.	Uncharacterized protein.	0.864
A0A1V6QLJ5	A0A1V6RD64	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.565
A0A1V6QLJ5	A0A1V6RJG9	Uncharacterized protein.	Uncharacterized protein.	0.549
A0A1V6QQC6	A0A1V6QE08	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QQC6	A0A1V6QHB4	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QQC6	A0A1V6QLJ5	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QQC6	A0A1V6QS48	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QQC6	A0A1V6QTG6	Uncharacterized protein.	Uncharacterized protein.	0.565
A0A1V6QQC6	A0A1V6QVI2	Uncharacterized protein.	Uncharacterized protein.	0.512

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