(12 nodes) Ubiquitin homologues network (Penicillium solitum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6RBQ3	Uncharacterized protein. (207 aa)
	A0A1V6RAY6	Ubiquitin-like domain-containing protein. (66 aa)
	A0A1V6R7K7	Ubiquitin-like domain-containing protein. (397 aa)
	A0A1V6R5Q2	Uncharacterized protein. (187 aa)
	A0A1V6R3G9	Uncharacterized protein. (381 aa)
	A0A1V6R2G3	Uncharacterized protein. (434 aa)
	A0A1V6QZX3	Ubiquitin carboxyl-terminal hydrolase. (577 aa)
	A0A1V6RKV4	Ubiquitin-like domain-containing protein. (155 aa)
	A0A1V6QK12	Ubiquitin-like domain-containing protein. (82 aa)
	A0A1V6QUJ9	Ubiquitin-like domain-containing protein. (89 aa)
	A0A1V6RJY6	Uncharacterized protein. (469 aa)
	A0A1V6REG0	Ubiquitin-like domain-containing protein. (154 aa)

Your Current Organism:

Penicillium solitum

NCBI taxonomy Id: 60172
Other names: ATCC 9923, CBS 288.36, CBS 424.89, FRR 937, IBT 3948, IFO 7765, IMI 039810, IMI 092225, LSHB P52, MUCL 28668, MUCL 29173, NRRL 937, P. solitum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6QK12	A0A1V6QUJ9	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.974
A0A1V6QK12	A0A1V6QZX3	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.862
A0A1V6QK12	A0A1V6R2G3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.635
A0A1V6QK12	A0A1V6R3G9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.646
A0A1V6QK12	A0A1V6R5Q2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.859
A0A1V6QK12	A0A1V6RAY6	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.974
A0A1V6QK12	A0A1V6RBQ3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.817
A0A1V6QK12	A0A1V6REG0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.930
A0A1V6QK12	A0A1V6RKV4	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.948
A0A1V6QUJ9	A0A1V6QK12	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.974
A0A1V6QUJ9	A0A1V6QZX3	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.507
A0A1V6QUJ9	A0A1V6R3G9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.895
A0A1V6QUJ9	A0A1V6R5Q2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.479
A0A1V6QUJ9	A0A1V6RAY6	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.819
A0A1V6QUJ9	A0A1V6RBQ3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.844
A0A1V6QUJ9	A0A1V6REG0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.842
A0A1V6QUJ9	A0A1V6RJY6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.825
A0A1V6QUJ9	A0A1V6RKV4	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.842
A0A1V6QZX3	A0A1V6QK12	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.862
A0A1V6QZX3	A0A1V6QUJ9	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin-like domain-containing protein.	0.507

page 1 of 5

Server load: low (14%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About