(25 nodes) Cytosolic large ribosomal subunit network (Aspergillus carbonarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1R3R9C3	Ribosomal_L28e domain-containing protein. (153 aa)
	A0A1R3R9Q3	KOW domain-containing protein. (149 aa)
	A0A1R3RA24	Uncharacterized protein. (251 aa)
	A0A1R3RB58	Uncharacterized protein. (131 aa)
	A0A1R3RCJ8	Ribosomal_L2_C domain-containing protein. (254 aa)
	A0A1R3RDG5	Ribosomal_L16 domain-containing protein. (223 aa)
	A0A1R3RLM4	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (184 aa)
	A0A1R3RNF0	Uncharacterized protein. (117 aa)
	A0A1R3RRF1	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	A0A1R3RS31	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
	A0A1R3RS55	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	A0A1R3RS64	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (65 aa)
	A0A1R3RSD0	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	A0A1R3RTM8	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (385 aa)
	A0A1R3RTS4	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (176 aa)
	A0A1R3RTT0	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
	A0A1R3RW22	KOW domain-containing protein. (134 aa)
	A0A1R3RYS9	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (392 aa)
	A0A1R3RZP7	Uncharacterized protein. (124 aa)
	A0A1R3S0E9	Uncharacterized protein. (109 aa)
	A0A1R3S1C6	Ribosomal_L7Ae domain-containing protein. (288 aa)
	A0A1R3S281	Ribosomal_L18_c domain-containing protein. (300 aa)
	A0A1R3S2P0	Uncharacterized protein. (202 aa)
	A0A1R3S2P4	Uncharacterized protein. (124 aa)
	A0A1R3S364	Uncharacterized protein. (192 aa)

Your Current Organism:

Aspergillus carbonarius

NCBI taxonomy Id: 602072
Other names: A. carbonarius ITEM 5010, Aspergillus carbonarius ITEM 5010

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1R3R9C3	A0A1R3R9Q3	Ribosomal_L28e domain-containing protein.	KOW domain-containing protein.	0.999
A0A1R3R9C3	A0A1R3RA24	Ribosomal_L28e domain-containing protein.	Uncharacterized protein.	0.999
A0A1R3R9C3	A0A1R3RB58	Ribosomal_L28e domain-containing protein.	Uncharacterized protein.	0.999
A0A1R3R9C3	A0A1R3RCJ8	Ribosomal_L28e domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.999
A0A1R3R9C3	A0A1R3RDG5	Ribosomal_L28e domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.998
A0A1R3R9C3	A0A1R3RLM4	Ribosomal_L28e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
A0A1R3R9C3	A0A1R3RNF0	Ribosomal_L28e domain-containing protein.	Uncharacterized protein.	0.999
A0A1R3R9C3	A0A1R3RRF1	Ribosomal_L28e domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
A0A1R3R9C3	A0A1R3RS31	Ribosomal_L28e domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
A0A1R3R9C3	A0A1R3RS55	Ribosomal_L28e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.999
A0A1R3R9C3	A0A1R3RS64	Ribosomal_L28e domain-containing protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
A0A1R3R9C3	A0A1R3RSD0	Ribosomal_L28e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.999
A0A1R3R9C3	A0A1R3RTM8	Ribosomal_L28e domain-containing protein.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.998
A0A1R3R9C3	A0A1R3RTS4	Ribosomal_L28e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
A0A1R3R9C3	A0A1R3RTT0	Ribosomal_L28e domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
A0A1R3R9C3	A0A1R3RW22	Ribosomal_L28e domain-containing protein.	KOW domain-containing protein.	0.999
A0A1R3R9C3	A0A1R3RYS9	Ribosomal_L28e domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999
A0A1R3R9C3	A0A1R3RZP7	Ribosomal_L28e domain-containing protein.	Uncharacterized protein.	0.999
A0A1R3R9C3	A0A1R3S0E9	Ribosomal_L28e domain-containing protein.	Uncharacterized protein.	0.999
A0A1R3R9C3	A0A1R3S1C6	Ribosomal_L28e domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999