54 items (Aspergillus carbonarius) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1R3RVL4	Protein kinase domain-containing protein. (490 aa)
	A0A1R3RWQ5	Uncharacterized protein. (512 aa)
	A0A1R3RYW7	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (654 aa)
	A0A1R3RZF5	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa)
	A0A1R3RZH2	TYR_PHOSPHATASE_2 domain-containing protein. (610 aa)
	A0A1R3RN63	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	A0A1R3RNH3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1000 aa)
	nudF	Nuclear distribution protein nudF; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (443 aa)
	A0A1R3RNN2	Spc7 domain-containing protein. (1535 aa)
	A0A1R3RNS6	CS domain-containing protein. (196 aa)
	A0A1R3RNZ6	Uncharacterized protein. (629 aa)
	A0A1R3RPV1	Arf-GAP domain-containing protein. (487 aa)
	A0A1R3RQ40	Uncharacterized protein. (740 aa)
	A0A1R3RQN4	Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. (213 aa)
	A0A1R3RQT3	ATP-grasp domain-containing protein. (481 aa)
	A0A1R3RR15	Uncharacterized protein. (279 aa)
	A0A1R3RRL6	HTH APSES-type domain-containing protein. (445 aa)
	A0A1R3RRY6	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (94 aa)
	A0A1R3RS48	Uncharacterized protein. (668 aa)
	A0A1R3RSF4	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (266 aa)
	A0A1R3RSL1	Uncharacterized protein. (4344 aa)
	A0A1R3RTQ7	NTF2 domain-containing protein. (161 aa)
	A0A1R3RU63	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (561 aa)
	A0A1R3R650	Protein kinase domain-containing protein. (1142 aa)
	A0A1R3R6F8	Csm1 domain-containing protein. (310 aa)
	A0A1R3RVF8	Uncharacterized protein. (356 aa)
	A0A1R3R7J6	Uncharacterized protein. (444 aa)
	A0A1R3R8M9	Uncharacterized protein. (287 aa)
	A0A1R3R9B0	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (767 aa)
	A0A1R3RA65	J domain-containing protein. (447 aa)
	A0A1R3RAN1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
	A0A1R3RCB1	Uncharacterized protein. (614 aa)
	A0A1R3RCH6	CP-type G domain-containing protein. (671 aa)
	A0A1R3RCK9	Uncharacterized protein. (491 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (247 aa)
	A0A1R3RD57	Uncharacterized protein. (878 aa)
	A0A1R3REL5	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (801 aa)
	A0A1R3RFE6	Uncharacterized protein. (253 aa)
	A0A1R3RGQ3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (780 aa)
	A0A1R3RGY3	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (739 aa)
	A0A1R3RZI4	Uncharacterized protein. (247 aa)
	A0A1R3RZQ5	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (811 aa)
	A0A1R3S176	Uncharacterized protein. (201 aa)
	A0A1R3S191	C2H2-type domain-containing protein. (111 aa)
	A0A1R3S1A2	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (213 aa)
	A0A1R3S202	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (388 aa)
	A0A1R3S259	Spindle pole body component. (952 aa)
	A0A1R3S2R4	CP-type G domain-containing protein. (540 aa)
	A0A1R3S380	Importin N-terminal domain-containing protein. (1072 aa)
	A0A1R3S383	Uncharacterized protein. (732 aa)
	A0A1R3RH48	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (212 aa)
	A0A1R3RHK7	Uncharacterized protein. (319 aa)
	A0A1R3RL12	Uncharacterized protein; Belongs to the actin family. (381 aa)
	A0A1R3RLU7	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (744 aa)

Your Current Organism:

Aspergillus carbonarius

NCBI taxonomy Id: 602072
Other names: A. carbonarius ITEM 5010, Aspergillus carbonarius ITEM 5010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1R3R650	A0A1R3RAN1	A0A1R3R650	A0A1R3RAN1	Protein kinase domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.819
A0A1R3R650	A0A1R3RFE6	A0A1R3R650	A0A1R3RFE6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.794
A0A1R3R650	A0A1R3RGQ3	A0A1R3R650	A0A1R3RGQ3	Protein kinase domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.820
A0A1R3R650	A0A1R3RGY3	A0A1R3R650	A0A1R3RGY3	Protein kinase domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.820
A0A1R3R650	A0A1R3RHK7	A0A1R3R650	A0A1R3RHK7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.477
A0A1R3R650	A0A1R3RL12	A0A1R3R650	A0A1R3RL12	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.703
A0A1R3R650	A0A1R3RN63	A0A1R3R650	A0A1R3RN63	Protein kinase domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.819
A0A1R3R650	A0A1R3RNH3	A0A1R3R650	A0A1R3RNH3	Protein kinase domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.813
A0A1R3R650	A0A1R3RNN2	A0A1R3R650	A0A1R3RNN2	Protein kinase domain-containing protein.	Spc7 domain-containing protein.	0.554
A0A1R3R650	A0A1R3RNS6	A0A1R3R650	A0A1R3RNS6	Protein kinase domain-containing protein.	CS domain-containing protein.	0.988
A0A1R3R650	A0A1R3RQ40	A0A1R3R650	A0A1R3RQ40	Protein kinase domain-containing protein.	Uncharacterized protein.	0.891
A0A1R3R650	A0A1R3RR15	A0A1R3R650	A0A1R3RR15	Protein kinase domain-containing protein.	Uncharacterized protein.	0.449
A0A1R3R650	A0A1R3RRY6	A0A1R3R650	A0A1R3RRY6	Protein kinase domain-containing protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.640
A0A1R3R650	A0A1R3RSL1	A0A1R3R650	A0A1R3RSL1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.727
A0A1R3R650	A0A1R3RVL4	A0A1R3R650	A0A1R3RVL4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.736
A0A1R3R650	A0A1R3RWQ5	A0A1R3R650	A0A1R3RWQ5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.513
A0A1R3R650	A0A1R3RZH2	A0A1R3R650	A0A1R3RZH2	Protein kinase domain-containing protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.979
A0A1R3R650	A0A1R3RZI4	A0A1R3R650	A0A1R3RZI4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.732
A0A1R3R650	A0A1R3RZQ5	A0A1R3R650	A0A1R3RZQ5	Protein kinase domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.682
A0A1R3R650	A0A1R3S202	A0A1R3R650	A0A1R3S202	Protein kinase domain-containing protein.	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.	0.590