STRINGSTRING
TSIB_0090 TSIB_0090 TSIB_0091 TSIB_0091 TSIB_0092 TSIB_0092 tgtA tgtA TSIB_0094 TSIB_0094 mre11 mre11 rad50 rad50 TSIB_0097 TSIB_0097 TSIB_0098 TSIB_0098 endA endA TSIB_1018 TSIB_1018 TSIB_1039 TSIB_1039 TSIB_1040 TSIB_1040 TSIB_1042 TSIB_1042 TSIB_1043 TSIB_1043 TSIB_1044 TSIB_1044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TSIB_0090Hypothetical protein. (136 aa)
TSIB_0091Glycosyltransferase, family 2. (348 aa)
TSIB_0092Sodium/phosphate symporter. (306 aa)
tgtAArchaeosine tRNA-guanine transglycosylase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family. (584 aa)
TSIB_0094Bipolar DNA helicase. (555 aa)
mre11DNA double-strand break repair protein mre11; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family. (442 aa)
rad50DNA double-strand break repair rad50 ATPase; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50/Mre11 complex; Belongs to the SMC family. RAD50 subfamily. (895 aa)
TSIB_00975'-3' nuclease, encoded next to Rad50 and Mre11-like protein. (403 aa)
TSIB_0098Ribosomal protein-alanine acetyltransferase RimI like protein. (120 aa)
endAtRNA-splicing endonuclease subunit alpha; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. (175 aa)
TSIB_1018Phosphate transport system regulator PhoU like protein. (215 aa)
TSIB_1039Hypothetical protein. (59 aa)
TSIB_1040Hypothetical protein. (61 aa)
TSIB_1042Metallophosphoesterase, calcineurin superfamily. (576 aa)
TSIB_1043Putative phosphate permease. (411 aa)
TSIB_1044Phosphate transport system regulator PhoU like protein. (231 aa)
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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