13 items (Taenia asiatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TASK_LOCUS1607	EGF-like domain-containing protein. (1338 aa)
	A0A0R3VWL8	Uncharacterized protein. (1535 aa)
	TASK_LOCUS2539	A2M_recep domain-containing protein. (292 aa)
	TASK_LOCUS4232	SERPIN domain-containing protein; Belongs to the serpin family. (355 aa)
	TASK_LOCUS5235	Uncharacterized protein. (211 aa)
	TASK_LOCUS5430	Uncharacterized protein. (583 aa)
	A0A0R3W5W8	Uncharacterized protein. (276 aa)
	TASK_LOCUS8306	Uncharacterized protein. (1313 aa)
	A0A0R3WDC2	Glutaredoxin domain-containing protein. (199 aa)
	TASK_LOCUS9140	Uncharacterized protein. (631 aa)
	A0A0R3WH43	Uncharacterized protein. (514 aa)
	TASK_LOCUS1487	Uncharacterized protein. (1360 aa)
	TASK_LOCUS1608	Uncharacterized protein. (1168 aa)

Your Current Organism:

Taenia asiatica

NCBI taxonomy Id: 60517
Other names: Asian tapeworm, T. asiatica, Taenia saginata asiatica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R3VWL8	A0A0R3W5W8	A0A0R3VWL8	A0A0R3W5W8	Uncharacterized protein.	Uncharacterized protein.	0.617
A0A0R3VWL8	A0A0R3WDC2	A0A0R3VWL8	A0A0R3WDC2	Uncharacterized protein.	Glutaredoxin domain-containing protein.	0.583
A0A0R3VWL8	A0A0R3WH43	A0A0R3VWL8	A0A0R3WH43	Uncharacterized protein.	Uncharacterized protein.	0.536
A0A0R3VWL8	TASK_LOCUS1487	A0A0R3VWL8	A0A158R738	Uncharacterized protein.	Uncharacterized protein.	0.425
A0A0R3VWL8	TASK_LOCUS5235	A0A0R3VWL8	A0A0R3W559	Uncharacterized protein.	Uncharacterized protein.	0.620
A0A0R3VWL8	TASK_LOCUS5430	A0A0R3VWL8	A0A0R3W5M6	Uncharacterized protein.	Uncharacterized protein.	0.583
A0A0R3VWL8	TASK_LOCUS8306	A0A0R3VWL8	A0A0R3WC86	Uncharacterized protein.	Uncharacterized protein.	0.425
A0A0R3VWL8	TASK_LOCUS9140	A0A0R3VWL8	A0A0R3WEA6	Uncharacterized protein.	Uncharacterized protein.	0.425
A0A0R3W5W8	A0A0R3VWL8	A0A0R3W5W8	A0A0R3VWL8	Uncharacterized protein.	Uncharacterized protein.	0.617
A0A0R3W5W8	A0A0R3WH43	A0A0R3W5W8	A0A0R3WH43	Uncharacterized protein.	Uncharacterized protein.	0.530
A0A0R3W5W8	TASK_LOCUS1487	A0A0R3W5W8	A0A158R738	Uncharacterized protein.	Uncharacterized protein.	0.504
A0A0R3W5W8	TASK_LOCUS1607	A0A0R3W5W8	A0A0R3VW14	Uncharacterized protein.	EGF-like domain-containing protein.	0.617
A0A0R3W5W8	TASK_LOCUS1608	A0A0R3W5W8	A0A158R755	Uncharacterized protein.	Uncharacterized protein.	0.617
A0A0R3W5W8	TASK_LOCUS2539	A0A0R3W5W8	A0A0R3VYP4	Uncharacterized protein.	A2M_recep domain-containing protein.	0.617
A0A0R3W5W8	TASK_LOCUS4232	A0A0R3W5W8	A0A0R3W2Y6	Uncharacterized protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.572
A0A0R3W5W8	TASK_LOCUS8306	A0A0R3W5W8	A0A0R3WC86	Uncharacterized protein.	Uncharacterized protein.	0.504
A0A0R3W5W8	TASK_LOCUS9140	A0A0R3W5W8	A0A0R3WEA6	Uncharacterized protein.	Uncharacterized protein.	0.504
A0A0R3WDC2	A0A0R3VWL8	A0A0R3WDC2	A0A0R3VWL8	Glutaredoxin domain-containing protein.	Uncharacterized protein.	0.583
A0A0R3WDC2	A0A0R3WH43	A0A0R3WDC2	A0A0R3WH43	Glutaredoxin domain-containing protein.	Uncharacterized protein.	0.530
A0A0R3WDC2	TASK_LOCUS1487	A0A0R3WDC2	A0A158R738	Glutaredoxin domain-containing protein.	Uncharacterized protein.	0.504