26 items (Taenia asiatica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TASK_LOCUS7380	FERM domain-containing protein. (2900 aa)
	TASK_LOCUS7437	LIM domain-containing protein. (359 aa)
	TASK_LOCUS1063	Uncharacterized protein. (3043 aa)
	TASK_LOCUS6513	Uncharacterized protein. (1025 aa)
	TASK_LOCUS6528	SH2 domain-containing protein. (829 aa)
	TASK_LOCUS1004	DHH domain-containing protein. (385 aa)
	TASK_LOCUS8957	Uncharacterized protein. (715 aa)
	TASK_LOCUS9479	Uncharacterized protein. (373 aa)
	TASK_LOCUS7806	SH2 domain-containing protein. (1450 aa)
	TASK_LOCUS8169	Integrin beta. (851 aa)
	TASK_LOCUS476	PH domain-containing protein. (841 aa)
	TASK_LOCUS8685	Uncharacterized protein. (763 aa)
	TASK_LOCUS1418	Uncharacterized protein. (498 aa)
	TASK_LOCUS1825	Uncharacterized protein. (317 aa)
	TASK_LOCUS1851	SH2 domain-containing protein. (619 aa)
	TASK_LOCUS2016	Protein kinase domain-containing protein. (168 aa)
	TASK_LOCUS2106	Protein kinase domain-containing protein. (315 aa)
	TASK_LOCUS3617	Uncharacterized protein. (352 aa)
	TASK_LOCUS3823	Uncharacterized protein. (389 aa)
	TASK_LOCUS4730	Uncharacterized protein. (222 aa)
	TASK_LOCUS4865	Uncharacterized protein. (586 aa)
	TASK_LOCUS4883	Uncharacterized protein. (277 aa)
	TASK_LOCUS5158	SH3 domain-containing protein. (120 aa)
	TASK_LOCUS6059	Uncharacterized protein. (437 aa)
	TASK_LOCUS6729	Uncharacterized protein. (257 aa)
	TASK_LOCUS6794	Uncharacterized protein. (268 aa)

Your Current Organism:

Taenia asiatica

NCBI taxonomy Id: 60517
Other names: Asian tapeworm, T. asiatica, Taenia saginata asiatica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TASK_LOCUS1063	TASK_LOCUS1418	A0A158R6X8	A0A0R3VVK1	Uncharacterized protein.	Uncharacterized protein.	0.688
TASK_LOCUS1063	TASK_LOCUS2016	A0A158R6X8	A0A0R3VX71	Uncharacterized protein.	Protein kinase domain-containing protein.	0.752
TASK_LOCUS1063	TASK_LOCUS2106	A0A158R6X8	A0A0R3VXG1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.752
TASK_LOCUS1063	TASK_LOCUS3617	A0A158R6X8	A0A0R3W1K1	Uncharacterized protein.	Uncharacterized protein.	0.861
TASK_LOCUS1063	TASK_LOCUS3823	A0A158R6X8	A0A0R3W220	Uncharacterized protein.	Uncharacterized protein.	0.482
TASK_LOCUS1063	TASK_LOCUS4730	A0A158R6X8	A0A0R3W425	Uncharacterized protein.	Uncharacterized protein.	0.809
TASK_LOCUS1063	TASK_LOCUS476	A0A158R6X8	A0A0R3VTC0	Uncharacterized protein.	PH domain-containing protein.	0.445
TASK_LOCUS1063	TASK_LOCUS5158	A0A158R6X8	A0A0R3W4Z4	Uncharacterized protein.	SH3 domain-containing protein.	0.688
TASK_LOCUS1063	TASK_LOCUS6513	A0A158R6X8	A0A158R922	Uncharacterized protein.	Uncharacterized protein.	0.984
TASK_LOCUS1063	TASK_LOCUS7437	A0A158R6X8	A0A0R3WA86	Uncharacterized protein.	LIM domain-containing protein.	0.483
TASK_LOCUS1063	TASK_LOCUS8169	A0A158R6X8	A0A158RA04	Uncharacterized protein.	Integrin beta.	0.809
TASK_LOCUS1063	TASK_LOCUS8685	A0A158R6X8	A0A158RA89	Uncharacterized protein.	Uncharacterized protein.	0.568
TASK_LOCUS1418	TASK_LOCUS1063	A0A0R3VVK1	A0A158R6X8	Uncharacterized protein.	Uncharacterized protein.	0.688
TASK_LOCUS1418	TASK_LOCUS2016	A0A0R3VVK1	A0A0R3VX71	Uncharacterized protein.	Protein kinase domain-containing protein.	0.796
TASK_LOCUS1418	TASK_LOCUS2106	A0A0R3VVK1	A0A0R3VXG1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.796
TASK_LOCUS1418	TASK_LOCUS3617	A0A0R3VVK1	A0A0R3W1K1	Uncharacterized protein.	Uncharacterized protein.	0.919
TASK_LOCUS1418	TASK_LOCUS3823	A0A0R3VVK1	A0A0R3W220	Uncharacterized protein.	Uncharacterized protein.	0.407
TASK_LOCUS1418	TASK_LOCUS4730	A0A0R3VVK1	A0A0R3W425	Uncharacterized protein.	Uncharacterized protein.	0.627
TASK_LOCUS1418	TASK_LOCUS4865	A0A0R3VVK1	A0A0R3W4C9	Uncharacterized protein.	Uncharacterized protein.	0.407
TASK_LOCUS1418	TASK_LOCUS6513	A0A0R3VVK1	A0A158R922	Uncharacterized protein.	Uncharacterized protein.	0.781