STRINGSTRING
NUTF2 NUTF2 FAAP24 FAAP24 RECQL5 RECQL5 EME1 EME1 RAD51C RAD51C BRIP1 BRIP1 SLX1 SLX1 RAD51D RAD51D FANCC FANCC XRCC2 XRCC2 DMC1 DMC1 PALB2 PALB2 FAN1 FAN1 RAD51 RAD51 DNA2 DNA2 TOP3A TOP3A ERCC4 ERCC4 RECQL4 RECQL4 MDC1 MDC1 RMI2 RMI2 RAD9A RAD9A MSH5 MSH5 TP53BP1 TP53BP1 BARD1 BARD1 EXO1 EXO1 XRCC3 XRCC3 SLX4 SLX4 FANCE FANCE CHEK2 CHEK2 FANCD2 FANCD2 FANCG FANCG TOPBP1 TOPBP1 XPA XPA MEIOB MEIOB RHNO1 RHNO1 ATR ATR RAD52 RAD52 MLH3 MLH3 PMS1 PMS1 PIF1 PIF1 RAD54B RAD54B NBN NBN EXD2 EXD2 RPA3 RPA3 RAD51B RAD51B MSH2 MSH2 MSH6 MSH6 FBH1 FBH1 TOP3B TOP3B RAD50 RAD50 RPA1 RPA1 UBE2T UBE2T MLH1 MLH1 FANCL FANCL SLF1 SLF1 MSH3 MSH3 FANCB FANCB FANCM FANCM SPO11 SPO11 RAD17 RAD17 ATRIP ATRIP HUS1 HUS1 WRN WRN BLM BLM RAD1 RAD1 FANCI FANCI ERCC5 ERCC5 BIVM BIVM TDRD3 TDRD3 RBBP8 RBBP8 PMS2 PMS2 BRCA2 BRCA2 BRCA1 BRCA1 MRE11 MRE11 MND1 MND1 PSMC3IP PSMC3IP ERCC1 ERCC1 ATM ATM FANCA FANCA RAD9B RAD9B CHEK1 CHEK1 ENSCSAP00000015863 ENSCSAP00000015863 DCLRE1B DCLRE1B MSH4 MSH4 RAD54L RAD54L RPA2 RPA2 ENSCSAP00000017299 ENSCSAP00000017299 ENSCSAP00000017472 ENSCSAP00000017472 RMI1 RMI1 FANCF FANCF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUTF2Nuclear transport factor 2. (127 aa)
FAAP24FA core complex associated protein 24. (215 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (991 aa)
EME1Essential meiotic structure-specific endonuclease 1. (571 aa)
RAD51CRAD51 paralog C. (367 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1248 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (275 aa)
RAD51DDNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily. (328 aa)
FANCCFanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. (559 aa)
XRCC2X-ray repair cross complementing 2. (280 aa)
DMC1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (340 aa)
PALB2Partner and localizer of BRCA2. (1183 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1016 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
DNA2DNA replication helicase/nuclease 2. (1061 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1000 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (735 aa)
RECQL4RecQ like helicase 4. (1210 aa)
MDC1Mediator of DNA damage checkpoint 1. (1964 aa)
RMI2RecQ mediated genome instability 2. (147 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (390 aa)
MSH5DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (850 aa)
TP53BP1Tumor protein p53 binding protein 1. (1977 aa)
BARD1BRCA1 associated RING domain 1. (777 aa)
EXO1Exonuclease 1. (845 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (346 aa)
SLX4Uncharacterized protein. (929 aa)
FANCEFA complementation group E. (323 aa)
CHEK2Protein kinase domain-containing protein. (318 aa)
FANCD2Uncharacterized protein. (1458 aa)
FANCGFA complementation group G. (622 aa)
TOPBP1DNA topoisomerase II binding protein 1. (1527 aa)
XPAXPA, DNA damage recognition and repair factor. (226 aa)
MEIOBMeiosis specific with OB-fold. (472 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (240 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2644 aa)
RAD52RAD52 homolog, DNA repair protein. (411 aa)
MLH3MutL homolog 3. (1237 aa)
PMS1PMS1 homolog 1, mismatch repair system component. (931 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (641 aa)
RAD54BUncharacterized protein. (908 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (753 aa)
EXD2Exonuclease 3'-5' domain containing 2. (636 aa)
RPA3Replication protein A3. (121 aa)
RAD51BRAD51 paralog B. (265 aa)
MSH2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (933 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1360 aa)
FBH1F-box DNA helicase 1. (971 aa)
TOP3BDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (862 aa)
RAD50Zinc-hook domain-containing protein. (1312 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (557 aa)
UBE2TUbiquitin conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (197 aa)
MLH1MutL homolog 1. (756 aa)
FANCLFA complementation group L. (461 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1059 aa)
MSH3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1125 aa)
FANCBFA complementation group B. (859 aa)
FANCMFA complementation group M. (2050 aa)
SPO11SPO11 initiator of meiotic double stranded breaks. (397 aa)
RAD17RAD17 checkpoint clamp loader component. (681 aa)
ATRIPATR interacting protein. (790 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (280 aa)
WRNWRN RecQ like helicase. (1399 aa)
BLMBLM RecQ like helicase. (1423 aa)
RAD1RAD1 checkpoint DNA exonuclease. (280 aa)
FANCIFA complementation group I. (1199 aa)
ERCC5ERCC excision repair 5, endonuclease. (1182 aa)
BIVMBasic, immunoglobulin-like variable motif containing. (503 aa)
TDRD3Tudor domain containing 3. (744 aa)
RBBP8RB binding protein 8, endonuclease. (897 aa)
PMS2PMS1 homolog 2, mismatch repair system component. (862 aa)
BRCA2BRCA2 DNA repair associated. (3420 aa)
BRCA1Uncharacterized protein. (663 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (708 aa)
MND1Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (205 aa)
PSMC3IPPSMC3 interacting protein. (217 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (298 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
FANCAFA complementation group A. (1455 aa)
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (417 aa)
CHEK1Checkpoint kinase 1. (749 aa)
ENSCSAP00000015863Uncharacterized protein. (81 aa)
DCLRE1BDNA cross-link repair 1B. (532 aa)
MSH4MutS homolog 4. (935 aa)
RAD54LRAD54 like. (747 aa)
RPA2Replication protein A2. (270 aa)
ENSCSAP00000017299Uncharacterized protein. (179 aa)
ENSCSAP00000017472ERCC4 domain-containing protein. (551 aa)
RMI1RecQ mediated genome instability 1. (625 aa)
FANCFFA complementation group F. (374 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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