STRINGSTRING
PCF11 PCF11 CPSF6 CPSF6 CPSF4L CPSF4L FIP1L1 FIP1L1 NUDT21 NUDT21 CLP1 CLP1 CPSF7 CPSF7 CPSF3 CPSF3 CPSF1 CPSF1 CSTF2 CSTF2 PAPOLA PAPOLA CPSF2 CPSF2 PAPOLG PAPOLG CSTF1 CSTF1 WDR33 WDR33 CPSF4 CPSF4 SYMPK SYMPK CSTF2T CSTF2T
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PCF11PCF11 cleavage and polyadenylation factor subunit. (1555 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (180 aa)
FIP1L1Fip1 domain-containing protein. (603 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (462 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (631 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1442 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
PAPOLGPoly(A) polymerase gamma. (736 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
WDR33WD repeat domain 33. (1336 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
SYMPKSymplekin. (1274 aa)
CSTF2TCleavage stimulation factor subunit 2 tau variant. (620 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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