(6 nodes) HMG box A DNA-binding domain, conserved site, and Prothymosin/parathymosin network (Chlorocebus sabaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCSAP00000002925	Uncharacterized protein. (113 aa)
	ENSCSAP00000008892	Uncharacterized protein. (190 aa)
	ENSCSAP00000011477	Uncharacterized protein. (207 aa)
	HMGB2	High mobility group box 2. (209 aa)
	HMGB4	High mobility group box 4. (189 aa)
	ENSCSAP00000018133	Uncharacterized protein. (215 aa)

Your Current Organism:

Chlorocebus sabaeus

NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCSAP00000002925	ENSCSAP00000008892	ENSCSAP00000002925	ENSCSAP00000008892	Uncharacterized protein.	Uncharacterized protein.	0.403
ENSCSAP00000002925	ENSCSAP00000011477	ENSCSAP00000002925	ENSCSAP00000011477	Uncharacterized protein.	Uncharacterized protein.	0.403
ENSCSAP00000002925	ENSCSAP00000018133	ENSCSAP00000002925	ENSCSAP00000018133	Uncharacterized protein.	Uncharacterized protein.	0.403
ENSCSAP00000008892	ENSCSAP00000002925	ENSCSAP00000008892	ENSCSAP00000002925	Uncharacterized protein.	Uncharacterized protein.	0.403
ENSCSAP00000008892	HMGB2	ENSCSAP00000008892	ENSCSAP00000014941	Uncharacterized protein.	High mobility group box 2.	0.601
ENSCSAP00000008892	HMGB4	ENSCSAP00000008892	ENSCSAP00000017350	Uncharacterized protein.	High mobility group box 4.	0.619
ENSCSAP00000011477	ENSCSAP00000002925	ENSCSAP00000011477	ENSCSAP00000002925	Uncharacterized protein.	Uncharacterized protein.	0.403
ENSCSAP00000011477	HMGB2	ENSCSAP00000011477	ENSCSAP00000014941	Uncharacterized protein.	High mobility group box 2.	0.602
ENSCSAP00000011477	HMGB4	ENSCSAP00000011477	ENSCSAP00000017350	Uncharacterized protein.	High mobility group box 4.	0.614
ENSCSAP00000018133	ENSCSAP00000002925	ENSCSAP00000018133	ENSCSAP00000002925	Uncharacterized protein.	Uncharacterized protein.	0.403
ENSCSAP00000018133	HMGB2	ENSCSAP00000018133	ENSCSAP00000014941	Uncharacterized protein.	High mobility group box 2.	0.598
ENSCSAP00000018133	HMGB4	ENSCSAP00000018133	ENSCSAP00000017350	Uncharacterized protein.	High mobility group box 4.	0.606
HMGB2	ENSCSAP00000008892	ENSCSAP00000014941	ENSCSAP00000008892	High mobility group box 2.	Uncharacterized protein.	0.601
HMGB2	ENSCSAP00000011477	ENSCSAP00000014941	ENSCSAP00000011477	High mobility group box 2.	Uncharacterized protein.	0.602
HMGB2	ENSCSAP00000018133	ENSCSAP00000014941	ENSCSAP00000018133	High mobility group box 2.	Uncharacterized protein.	0.598
HMGB4	ENSCSAP00000008892	ENSCSAP00000017350	ENSCSAP00000008892	High mobility group box 4.	Uncharacterized protein.	0.619
HMGB4	ENSCSAP00000011477	ENSCSAP00000017350	ENSCSAP00000011477	High mobility group box 4.	Uncharacterized protein.	0.614
HMGB4	ENSCSAP00000018133	ENSCSAP00000017350	ENSCSAP00000018133	High mobility group box 4.	Uncharacterized protein.	0.606

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