STRINGSTRING
PRPF19 PRPF19 AQR AQR XAB2 XAB2 ISY1 ISY1 CRNKL1 CRNKL1 SNW1 SNW1 CDC5L CDC5L CTNNBL1 CTNNBL1 BUD31 BUD31 CWC15 CWC15 PLRG1 PLRG1 BCAS2 BCAS2 PPIE PPIE RBM22 RBM22
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRPF19Pre-mRNA processing factor 19. (504 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1492 aa)
XAB2XPA binding protein 2. (855 aa)
ISY1Uncharacterized protein. (285 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (687 aa)
SNW1SNW domain containing 1. (536 aa)
CDC5LCell division cycle 5 like. (802 aa)
CTNNBL1DUF1716 domain-containing protein. (563 aa)
BUD31BUD31 homolog. (144 aa)
CWC15CWC15 spliceosome associated protein homolog. (229 aa)
PLRG1Pleiotropic regulator 1. (514 aa)
BCAS2BCAS2 pre-mRNA processing factor. (225 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (304 aa)
RBM22Uncharacterized protein. (394 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (14%) [HD]