STRINGSTRING
RPGRIP1 RPGRIP1 ATP2B1 ATP2B1 SOX9 SOX9 SDK2 SDK2 USH1C USH1C IGSF22 IGSF22 RPGRIP1L RPGRIP1L GDF11 GDF11 CNTF CNTF PDE6C PDE6C ROM1 ROM1 SMARCD3 SMARCD3 ENSCSAP00000003179 ENSCSAP00000003179 CASP2 CASP2 TFAP2A TFAP2A NTRK2 NTRK2 OBSL1 OBSL1 RORB RORB DSCAM DSCAM HIPK2 HIPK2 IHH IHH CABP4 CABP4 SLC1A1 SLC1A1 THRB THRB TOPORS TOPORS TGIF2 TGIF2 ATP2B2 ATP2B2 TSPAN12 TSPAN12 TTC8 TTC8 SOX8 SOX8 PTF1A PTF1A CALB1 CALB1 TFAP2B TFAP2B BSG BSG ACTL6A ACTL6A MEGF11 MEGF11 CRB2 CRB2 CRB1 CRB1 BBS4 BBS4 ATP2B4 ATP2B4 USP45 USP45 RP1 RP1 RS1 RS1 TGFB2 TGFB2 NOTCH1 NOTCH1 NRL NRL PROM1 PROM1 HCN1 HCN1 AHI1 AHI1 PTPRM PTPRM SDK1 SDK1 ATP8A2 ATP8A2 VSX1 VSX1 FAT3 FAT3 SLC17A8 SLC17A8 NAGLU NAGLU STAT3 STAT3 GPM6A GPM6A FOXN4 FOXN4 SLC17A7 SLC17A7 THY1 THY1 RDH13 RDH13 HIPK1 HIPK1 GNAT2 GNAT2 BARHL2 BARHL2 RPE65 RPE65 ATOH7 ATOH7 ZHX2 ZHX2 NEUROD1 NEUROD1 BHLHE23 BHLHE23 FJX1 FJX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPGRIP1RPGR interacting protein 1. (1266 aa)
ATP2B1Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1176 aa)
SOX9SRY-box transcription factor 9. (509 aa)
SDK2Sidekick cell adhesion molecule 2. (2174 aa)
USH1CUSH1 protein network component harmonin. (562 aa)
IGSF22Immunoglobulin superfamily member 22. (1326 aa)
RPGRIP1LRPGRIP1 like. (1263 aa)
GDF11Growth differentiation factor 11. (406 aa)
CNTFCiliary neurotrophic factor. (200 aa)
PDE6CPhosphodiesterase. (858 aa)
ROM1Retinal outer segment membrane protein 1. (351 aa)
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3. (470 aa)
ENSCSAP00000003179Uncharacterized protein. (737 aa)
CASP2Caspase 2; Belongs to the peptidase C14A family. (453 aa)
TFAP2ATranscription factor AP-2 alpha. (318 aa)
NTRK2Neurotrophic receptor tyrosine kinase 2. (477 aa)
OBSL1Obscurin like 1. (1896 aa)
RORBRAR related orphan receptor B. (459 aa)
DSCAMDS cell adhesion molecule. (1641 aa)
HIPK2Homeodomain interacting protein kinase 2. (1198 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (411 aa)
CABP4Calcium binding protein 4. (274 aa)
SLC1A1Amino acid transporter. (524 aa)
THRBThyroid hormone receptor beta. (461 aa)
TOPORSTOP1 binding arginine/serine rich protein. (1044 aa)
TGIF2TGFB induced factor homeobox 2. (237 aa)
ATP2B2Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1199 aa)
TSPAN12Tetraspanin. (305 aa)
TTC8Tetratricopeptide repeat domain 8. (515 aa)
SOX8SRY-box transcription factor 8. (446 aa)
PTF1APancreas associated transcription factor 1a. (329 aa)
CALB1Calbindin 1. (261 aa)
TFAP2BTranscription factor AP-2 beta. (471 aa)
BSGBasigin (Ok blood group). (385 aa)
ACTL6AActin like 6A; Belongs to the actin family. (429 aa)
MEGF11Multiple EGF like domains 11. (1015 aa)
CRB2Crumbs cell polarity complex component 2. (1287 aa)
CRB1Crumbs cell polarity complex component 1. (1335 aa)
BBS4Bardet-Biedl syndrome 4. (494 aa)
ATP2B4Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1170 aa)
USP45Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (773 aa)
RP1RP1 axonemal microtubule associated. (2152 aa)
RS1Retinoschisin 1. (224 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
NOTCH1Notch receptor 1. (2555 aa)
NRLNeural retina leucine zipper. (237 aa)
PROM1Prominin 1. (855 aa)
HCN1Cyclic nucleotide-binding domain-containing protein. (604 aa)
AHI1Abelson helper integration site 1. (1202 aa)
PTPRMProtein tyrosine phosphatase receptor type M. (1445 aa)
SDK1Sidekick cell adhesion molecule 1. (2115 aa)
ATP8A2Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1174 aa)
VSX1Visual system homeobox 1. (366 aa)
FAT3FAT atypical cadherin 3. (4592 aa)
SLC17A8Solute carrier family 17 member 8. (589 aa)
NAGLUN-acetyl-alpha-glucosaminidase. (587 aa)
STAT3Signal transducer and activator of transcription. (770 aa)
GPM6AGlycoprotein M6A. (278 aa)
FOXN4Forkhead box N4. (517 aa)
SLC17A7Solute carrier family 17 member 7. (560 aa)
THY1Thy-1 cell surface antigen. (161 aa)
RDH13Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (331 aa)
HIPK1Homeodomain interacting protein kinase 1. (1210 aa)
GNAT2G protein subunit alpha transducin 2. (357 aa)
BARHL2BarH like homeobox 2. (388 aa)
RPE65Retinoid isomerohydrolase RPE65. (531 aa)
ATOH7Atonal bHLH transcription factor 7. (152 aa)
ZHX2Zinc fingers and homeoboxes 2. (837 aa)
NEUROD1Neurogenic differentiation factor. (356 aa)
BHLHE23Basic helix-loop-helix family member e23. (225 aa)
FJX1Four-jointed box kinase 1. (437 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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