STRINGSTRING
CPSF1 CPSF1 NCBP1 NCBP1 CPSF3 CPSF3 TUT1 TUT1 CPSF6 CPSF6 ERN1 ERN1 PCF11 PCF11 CPSF7 CPSF7 CPSF4L CPSF4L POLR2I POLR2I NUDT21 NUDT21 ZNRD1 ZNRD1 CPSF2 CPSF2 CPSF4 CPSF4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CPSF1Cleavage and polyadenylation specific factor 1. (1442 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (631 aa)
TUT1PAP-associated domain-containing protein. (784 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
ERN1Endoplasmic reticulum to nucleus signaling 1. (977 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1555 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (462 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (180 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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