STRINGSTRING
TENT4B TENT4B CLP1 CLP1 CPSF7 CPSF7 TUT1 TUT1 CPSF3 CPSF3 CPSF1 CPSF1 APP APP ZC3H3 ZC3H3 CSTF2 CSTF2 PAPOLA PAPOLA MBLAC1 MBLAC1 CSTF2T CSTF2T LSM10 LSM10 FNDC10 FNDC10 TMEM240 TMEM240 SSU72 SSU72 AHCYL1 AHCYL1 ZNF473 ZNF473 SYMPK SYMPK ENSCSAP00000014101 ENSCSAP00000014101 RPRD2 RPRD2 CPSF4 CPSF4 POLR2D POLR2D LSM11 LSM11 NCBP1 NCBP1 CPSF2 CPSF2 LEO1 LEO1 MTPAP MTPAP CDC73 CDC73 SCAF8 SCAF8 RPRD1B RPRD1B PABPC1L PABPC1L CSTF1 CSTF1 PNPT1 PNPT1 PAPOLG PAPOLG TENT2 TENT2 PCF11 PCF11 PAF1 PAF1 WDR33 WDR33 SLBP SLBP CPSF6 CPSF6 APLP1 APLP1 CPSF4L CPSF4L GRSF1 GRSF1 NUDT21 NUDT21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TENT4BTerminal nucleotidyltransferase 4B. (635 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (425 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (462 aa)
TUT1PAP-associated domain-containing protein. (784 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (631 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1442 aa)
APPAmyloid beta precursor protein. (770 aa)
ZC3H3Zinc finger CCCH-type containing 3. (964 aa)
CSTF2Cleavage stimulation factor subunit 2. (597 aa)
PAPOLAPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (745 aa)
MBLAC1Metallo-beta-lactamase domain containing 1. (266 aa)
CSTF2TCleavage stimulation factor subunit 2 tau variant. (620 aa)
LSM10LSM10, U7 small nuclear RNA associated. (123 aa)
FNDC10Fibronectin type III domain containing 10. (226 aa)
TMEM240Transmembrane protein 240. (173 aa)
SSU72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
AHCYL1Adenosylhomocysteinase like 1; Belongs to the adenosylhomocysteinase family. (530 aa)
ZNF473Zinc finger protein 473. (871 aa)
SYMPKSymplekin. (1274 aa)
ENSCSAP00000014101CID domain-containing protein. (239 aa)
RPRD2Uncharacterized protein. (1171 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
LSM11LSM11, U7 small nuclear RNA associated. (360 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
MTPAPMitochondrial poly(A) polymerase. (582 aa)
CDC73Cell division cycle 73. (531 aa)
SCAF8SR-related CTD associated factor 8. (1292 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (614 aa)
CSTF1Cleavage stimulation factor subunit 1. (431 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (784 aa)
PAPOLGPoly(A) polymerase gamma. (736 aa)
TENT2Terminal nucleotidyltransferase 2. (484 aa)
PCF11PCF11 cleavage and polyadenylation factor subunit. (1555 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (531 aa)
WDR33WD repeat domain 33. (1336 aa)
SLBPStem-loop binding protein. (275 aa)
CPSF6Cleavage and polyadenylation specific factor 6. (588 aa)
APLP1Amyloid beta precursor like protein 1. (652 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (180 aa)
GRSF1G-rich RNA sequence binding factor 1. (479 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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