STRINGSTRING
PML PML HNRNPCL1 HNRNPCL1 EXOSC10 EXOSC10 ATM ATM ERCC1 ERCC1 PINX1 PINX1 TNKS TNKS HNRNPC HNRNPC PARP1 PARP1 TINF2 TINF2 ENSCSAP00000011749 ENSCSAP00000011749 DCP2 DCP2 XRCC4 XRCC4 SMG6 SMG6 SRC SRC TERF1 TERF1 PIF1 PIF1 GNL3L GNL3L XRN1 XRN1 CTC1 CTC1 POT1 POT1 SLX4 SLX4 HNRNPU HNRNPU ERCC4 ERCC4 TNKS2 TNKS2 SLX1 SLX1 MCRS1 MCRS1 NAT10 NAT10 TENT4B TENT4B TEN1 TEN1 TERF2 TERF2 ACD ACD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PMLPromyelocytic leukemia. (819 aa)
HNRNPCL1RRM domain-containing protein. (293 aa)
EXOSC10Exosome component 10. (884 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (298 aa)
PINX1PIN2 (TERF1) interacting telomerase inhibitor 1. (328 aa)
TNKSPoly [ADP-ribose] polymerase. (1327 aa)
HNRNPCHeterogeneous nuclear ribonucleoprotein C (C1/C2). (293 aa)
PARP1Poly(ADP-ribose) polymerase 1. (709 aa)
TINF2TERF1 interacting nuclear factor 2. (424 aa)
ENSCSAP00000011749G-patch domain-containing protein. (330 aa)
DCP2Decapping mRNA 2. (420 aa)
XRCC4X-ray repair cross complementing 4. (334 aa)
SMG6SMG6 nonsense mediated mRNA decay factor. (1419 aa)
SRCTyrosine-protein kinase. (633 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (440 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (641 aa)
GNL3LG protein nucleolar 3 like. (472 aa)
XRN15'-3' exoribonuclease 1. (1707 aa)
CTC1CST telomere replication complex component 1. (1209 aa)
POT1Protection of telomeres 1. (634 aa)
SLX4Uncharacterized protein. (929 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (735 aa)
TNKS2Poly [ADP-ribose] polymerase. (1166 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (275 aa)
MCRS1Microspherule protein 1. (462 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1026 aa)
TENT4BTerminal nucleotidyltransferase 4B. (635 aa)
TEN1Uncharacterized protein. (94 aa)
TERF2Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (500 aa)
ACDACD shelterin complex subunit and telomerase recruitment factor. (537 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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