STRINGSTRING
RARB RARB EFEMP1 EFEMP1 SNAI2 SNAI2 BMP4 BMP4 GLI3 GLI3 NKX3-2 NKX3-2 WNT9A WNT9A CTNNB1 CTNNB1 ADAMTS12 ADAMTS12 PTPN11 PTPN11 RFLNA RFLNA GREM1 GREM1 SOX9 SOX9 RARG RARG CHADL CHADL PTHLH PTHLH LTBP3 LTBP3 IHH IHH CCN4 CCN4 GDF5 GDF5 TGFBR1 TGFBR1 RFLNB RFLNB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RARBRetinoic acid receptor beta. (448 aa)
EFEMP1EGF containing fibulin extracellular matrix protein 1. (493 aa)
SNAI2Snail family transcriptional repressor 2. (268 aa)
BMP4Bone morphogenetic protein 4. (408 aa)
GLI3GLI family zinc finger 3. (1459 aa)
NKX3-2NK3 homeobox 2. (333 aa)
WNT9AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (295 aa)
CTNNB1Catenin beta 1. (781 aa)
ADAMTS12ADAM metallopeptidase with thrombospondin type 1 motif 12. (1598 aa)
PTPN11Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (596 aa)
RFLNARefilin A. (216 aa)
GREM1Gremlin. (184 aa)
SOX9SRY-box transcription factor 9. (509 aa)
RARGRetinoic acid receptor gamma. (443 aa)
CHADLChondroadherin like. (762 aa)
PTHLHParathyroid hormone like hormone. (177 aa)
LTBP3Latent transforming growth factor beta binding protein 3. (1298 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (411 aa)
CCN4Cellular communication network factor 4. (336 aa)
GDF5Growth differentiation factor 5. (499 aa)
TGFBR1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (434 aa)
RFLNBRefilin B. (216 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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