Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BIVM | ERCC1 | ENSCSAP00000013510 | ENSCSAP00000014865 | Basic, immunoglobulin-like variable motif containing. | ERCC excision repair 1, endonuclease non-catalytic subunit. | 0.788 |
| BIVM | ERCC2 | ENSCSAP00000013510 | ENSCSAP00000014854 | Basic, immunoglobulin-like variable motif containing. | ERCC excision repair 2, TFIIH core complex helicase subunit. | 0.887 |
| BIVM | ERCC4 | ENSCSAP00000013510 | ENSCSAP00000004416 | Basic, immunoglobulin-like variable motif containing. | ERCC excision repair 4, endonuclease catalytic subunit. | 0.823 |
| BIVM | NTHL1 | ENSCSAP00000013510 | ENSCSAP00000007271 | Basic, immunoglobulin-like variable motif containing. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.534 |
| BIVM | OGG1 | ENSCSAP00000013510 | ENSCSAP00000006823 | Basic, immunoglobulin-like variable motif containing. | 8-oxoguanine DNA glycosylase. | 0.448 |
| BIVM | XPA | ENSCSAP00000013510 | ENSCSAP00000007154 | Basic, immunoglobulin-like variable motif containing. | XPA, DNA damage recognition and repair factor. | 0.793 |
| ERCC1 | BIVM | ENSCSAP00000014865 | ENSCSAP00000013510 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Basic, immunoglobulin-like variable motif containing. | 0.788 |
| ERCC1 | ERCC2 | ENSCSAP00000014865 | ENSCSAP00000014854 | ERCC excision repair 1, endonuclease non-catalytic subunit. | ERCC excision repair 2, TFIIH core complex helicase subunit. | 0.838 |
| ERCC1 | ERCC4 | ENSCSAP00000014865 | ENSCSAP00000004416 | ERCC excision repair 1, endonuclease non-catalytic subunit. | ERCC excision repair 4, endonuclease catalytic subunit. | 0.999 |
| ERCC1 | NTHL1 | ENSCSAP00000014865 | ENSCSAP00000007271 | ERCC excision repair 1, endonuclease non-catalytic subunit. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.541 |
| ERCC1 | OGG1 | ENSCSAP00000014865 | ENSCSAP00000006823 | ERCC excision repair 1, endonuclease non-catalytic subunit. | 8-oxoguanine DNA glycosylase. | 0.597 |
| ERCC1 | XPA | ENSCSAP00000014865 | ENSCSAP00000007154 | ERCC excision repair 1, endonuclease non-catalytic subunit. | XPA, DNA damage recognition and repair factor. | 0.983 |
| ERCC2 | BIVM | ENSCSAP00000014854 | ENSCSAP00000013510 | ERCC excision repair 2, TFIIH core complex helicase subunit. | Basic, immunoglobulin-like variable motif containing. | 0.887 |
| ERCC2 | ERCC1 | ENSCSAP00000014854 | ENSCSAP00000014865 | ERCC excision repair 2, TFIIH core complex helicase subunit. | ERCC excision repair 1, endonuclease non-catalytic subunit. | 0.838 |
| ERCC2 | ERCC4 | ENSCSAP00000014854 | ENSCSAP00000004416 | ERCC excision repair 2, TFIIH core complex helicase subunit. | ERCC excision repair 4, endonuclease catalytic subunit. | 0.848 |
| ERCC2 | NTHL1 | ENSCSAP00000014854 | ENSCSAP00000007271 | ERCC excision repair 2, TFIIH core complex helicase subunit. | Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. | 0.464 |
| ERCC2 | OGG1 | ENSCSAP00000014854 | ENSCSAP00000006823 | ERCC excision repair 2, TFIIH core complex helicase subunit. | 8-oxoguanine DNA glycosylase. | 0.577 |
| ERCC2 | XPA | ENSCSAP00000014854 | ENSCSAP00000007154 | ERCC excision repair 2, TFIIH core complex helicase subunit. | XPA, DNA damage recognition and repair factor. | 0.975 |
| ERCC4 | BIVM | ENSCSAP00000004416 | ENSCSAP00000013510 | ERCC excision repair 4, endonuclease catalytic subunit. | Basic, immunoglobulin-like variable motif containing. | 0.823 |
| ERCC4 | ERCC1 | ENSCSAP00000004416 | ENSCSAP00000014865 | ERCC excision repair 4, endonuclease catalytic subunit. | ERCC excision repair 1, endonuclease non-catalytic subunit. | 0.999 |
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