STRINGSTRING
COG7 COG7 GBF1 GBF1 LACRT LACRT PAQR3 PAQR3 RAB6A RAB6A RIPOR1 RIPOR1 VPS13D VPS13D SORL1 SORL1 ARL1 ARL1 GAK GAK OPTN OPTN ARL5B ARL5B TMED10 TMED10 VPS13C VPS13C GOLPH3 GOLPH3 ZDHHC15 ZDHHC15 GCC2 GCC2 RAB6B RAB6B RAB33B RAB33B ARFRP1 ARFRP1 PACS1 PACS1 OBSL1 OBSL1 IFT20 IFT20 BICD2 BICD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COG7Component of oligomeric golgi complex 7. (766 aa)
GBF1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1856 aa)
LACRTLacritin. (137 aa)
PAQR3Progestin and adipoQ receptor family member 3. (311 aa)
RAB6ARAB6A, member RAS oncogene family. (208 aa)
RIPOR1RHO family interacting cell polarization regulator 1. (1218 aa)
VPS13DVacuolar protein sorting 13 homolog D. (4387 aa)
SORL1Sortilin related receptor 1. (2214 aa)
ARL1ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
GAKCyclin G associated kinase. (1311 aa)
OPTNOptineurin. (577 aa)
ARL5BADP ribosylation factor like GTPase 5B; Belongs to the small GTPase superfamily. Arf family. (180 aa)
TMED10Transmembrane p24 trafficking protein 10. (219 aa)
VPS13CVacuolar protein sorting 13 homolog C. (3754 aa)
GOLPH3Golgi phosphoprotein 3. (298 aa)
ZDHHC15Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (328 aa)
GCC2GRIP and coiled-coil domain containing 2. (1685 aa)
RAB6BRAB6B, member RAS oncogene family. (208 aa)
RAB33BRAB33B, member RAS oncogene family. (229 aa)
ARFRP1ADP ribosylation factor related protein 1. (201 aa)
PACS1Phosphofurin acidic cluster sorting protein 1. (962 aa)
OBSL1Obscurin like 1. (1896 aa)
IFT20Intraflagellar transport 20. (163 aa)
BICD2BICD cargo adaptor 2. (824 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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