Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGRN | APOE | ENSCSAP00000017336 | ENSCSAP00000014799 | Agrin. | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | 0.532 |
| AGRN | LRP1 | ENSCSAP00000017336 | ENSCSAP00000001271 | Agrin. | LDL receptor related protein 1. | 0.658 |
| AGRN | NID1 | ENSCSAP00000017336 | ENSCSAP00000006014 | Agrin. | Nidogen 1. | 0.789 |
| AGRN | PTPRF | ENSCSAP00000017336 | ENSCSAP00000016828 | Agrin. | Protein tyrosine phosphatase receptor type F. | 0.474 |
| AGRN | PTPRS | ENSCSAP00000017336 | ENSCSAP00000006208 | Agrin. | Protein tyrosine phosphatase receptor type S. | 0.631 |
| APOE | AGRN | ENSCSAP00000014799 | ENSCSAP00000017336 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | Agrin. | 0.532 |
| APOE | ENSCSAP00000009714 | ENSCSAP00000014799 | ENSCSAP00000009714 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | Uncharacterized protein. | 0.588 |
| APOE | GPNMB | ENSCSAP00000014799 | ENSCSAP00000010105 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | Glycoprotein nmb. | 0.479 |
| APOE | LPL | ENSCSAP00000014799 | ENSCSAP00000012759 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. | 0.913 |
| APOE | LRP1 | ENSCSAP00000014799 | ENSCSAP00000001271 | Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...] | LDL receptor related protein 1. | 0.976 |
| COL2A1 | COL5A1 | ENSCSAP00000002621 | ENSCSAP00000011688 | Collagen type II alpha 1 chain. | Collagen type V alpha 1 chain. | 0.644 |
| COL2A1 | COL5A3 | ENSCSAP00000002621 | ENSCSAP00000003716 | Collagen type II alpha 1 chain. | Collagen type V alpha 3 chain. | 0.652 |
| COL2A1 | COMP | ENSCSAP00000002621 | ENSCSAP00000001592 | Collagen type II alpha 1 chain. | Cartilage oligomeric matrix protein. | 0.643 |
| COL2A1 | ITGA2 | ENSCSAP00000002621 | ENSCSAP00000012702 | Collagen type II alpha 1 chain. | Integrin subunit alpha 2; Belongs to the integrin alpha chain family. | 0.739 |
| COL5A1 | COL2A1 | ENSCSAP00000011688 | ENSCSAP00000002621 | Collagen type V alpha 1 chain. | Collagen type II alpha 1 chain. | 0.644 |
| COL5A1 | COL5A3 | ENSCSAP00000011688 | ENSCSAP00000003716 | Collagen type V alpha 1 chain. | Collagen type V alpha 3 chain. | 0.720 |
| COL5A3 | COL2A1 | ENSCSAP00000003716 | ENSCSAP00000002621 | Collagen type V alpha 3 chain. | Collagen type II alpha 1 chain. | 0.652 |
| COL5A3 | COL5A1 | ENSCSAP00000003716 | ENSCSAP00000011688 | Collagen type V alpha 3 chain. | Collagen type V alpha 1 chain. | 0.720 |
| COMP | COL2A1 | ENSCSAP00000001592 | ENSCSAP00000002621 | Cartilage oligomeric matrix protein. | Collagen type II alpha 1 chain. | 0.643 |
| COMP | ITGA2 | ENSCSAP00000001592 | ENSCSAP00000012702 | Cartilage oligomeric matrix protein. | Integrin subunit alpha 2; Belongs to the integrin alpha chain family. | 0.710 |
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