STRINGSTRING
NOTCH1 NOTCH1 NRL NRL PROM1 PROM1 RPGRIP1 RPGRIP1 HCN1 HCN1 AHI1 AHI1 PTPRM PTPRM SDK1 SDK1 ATP8A2 ATP8A2 VSX1 VSX1 FAT3 FAT3 NAGLU NAGLU STAT3 STAT3 FOXN4 FOXN4 THY1 THY1 CDON CDON RDH13 RDH13 HIPK1 HIPK1 GNAT2 GNAT2 RPE65 RPE65 MFSD2A MFSD2A ZHX2 ZHX2 BHLHE23 BHLHE23 PROX1 PROX1 MAN2A1 MAN2A1 RS1 RS1 RP1 RP1 BBS4 BBS4 CRB1 CRB1 CRB2 CRB2 MEGF11 MEGF11 TFAP2B TFAP2B CALB1 CALB1 PTF1A PTF1A SOX8 SOX8 DLL1 DLL1 TTC8 TTC8 TSPAN12 TSPAN12 TOPORS TOPORS THRB THRB LRP5 LRP5 SLC1A1 SLC1A1 CABP4 CABP4 IHH IHH HIPK2 HIPK2 DSCAM DSCAM RORB RORB OBSL1 OBSL1 NTRK2 NTRK2 TFAP2A TFAP2A ROM1 ROM1 NECTIN3 NECTIN3 PDE6C PDE6C IMPG2 IMPG2 CNTF CNTF RPGRIP1L RPGRIP1L IGSF22 IGSF22 USH1C USH1C SDK2 SDK2 SOX9 SOX9 FJX1 FJX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NOTCH1Notch receptor 1. (2555 aa)
NRLNeural retina leucine zipper. (237 aa)
PROM1Prominin 1. (855 aa)
RPGRIP1RPGR interacting protein 1. (1266 aa)
HCN1Cyclic nucleotide-binding domain-containing protein. (604 aa)
AHI1Abelson helper integration site 1. (1202 aa)
PTPRMProtein tyrosine phosphatase receptor type M. (1445 aa)
SDK1Sidekick cell adhesion molecule 1. (2115 aa)
ATP8A2Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1174 aa)
VSX1Visual system homeobox 1. (366 aa)
FAT3FAT atypical cadherin 3. (4592 aa)
NAGLUN-acetyl-alpha-glucosaminidase. (587 aa)
STAT3Signal transducer and activator of transcription. (770 aa)
FOXN4Forkhead box N4. (517 aa)
THY1Thy-1 cell surface antigen. (161 aa)
CDONCell adhesion associated, oncogene regulated. (1287 aa)
RDH13Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (331 aa)
HIPK1Homeodomain interacting protein kinase 1. (1210 aa)
GNAT2G protein subunit alpha transducin 2. (357 aa)
RPE65Retinoid isomerohydrolase RPE65. (531 aa)
MFSD2AMajor facilitator superfamily domain containing 2A. (530 aa)
ZHX2Zinc fingers and homeoboxes 2. (837 aa)
BHLHE23Basic helix-loop-helix family member e23. (225 aa)
PROX1Prospero homeobox 1. (737 aa)
MAN2A1Alpha-mannosidase. (1144 aa)
RS1Retinoschisin 1. (224 aa)
RP1RP1 axonemal microtubule associated. (2152 aa)
BBS4Bardet-Biedl syndrome 4. (494 aa)
CRB1Crumbs cell polarity complex component 1. (1335 aa)
CRB2Crumbs cell polarity complex component 2. (1287 aa)
MEGF11Multiple EGF like domains 11. (1015 aa)
TFAP2BTranscription factor AP-2 beta. (471 aa)
CALB1Calbindin 1. (261 aa)
PTF1APancreas associated transcription factor 1a. (329 aa)
SOX8SRY-box transcription factor 8. (446 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (723 aa)
TTC8Tetratricopeptide repeat domain 8. (515 aa)
TSPAN12Tetraspanin. (305 aa)
TOPORSTOP1 binding arginine/serine rich protein. (1044 aa)
THRBThyroid hormone receptor beta. (461 aa)
LRP5LDL receptor related protein 5. (1451 aa)
SLC1A1Amino acid transporter. (524 aa)
CABP4Calcium binding protein 4. (274 aa)
IHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (411 aa)
HIPK2Homeodomain interacting protein kinase 2. (1198 aa)
DSCAMDS cell adhesion molecule. (1641 aa)
RORBRAR related orphan receptor B. (459 aa)
OBSL1Obscurin like 1. (1896 aa)
NTRK2Neurotrophic receptor tyrosine kinase 2. (477 aa)
TFAP2ATranscription factor AP-2 alpha. (318 aa)
ROM1Retinal outer segment membrane protein 1. (351 aa)
NECTIN3Nectin cell adhesion molecule 3. (510 aa)
PDE6CPhosphodiesterase. (858 aa)
IMPG2Interphotoreceptor matrix proteoglycan 2. (1245 aa)
CNTFCiliary neurotrophic factor. (200 aa)
RPGRIP1LRPGRIP1 like. (1263 aa)
IGSF22Immunoglobulin superfamily member 22. (1326 aa)
USH1CUSH1 protein network component harmonin. (562 aa)
SDK2Sidekick cell adhesion molecule 2. (2174 aa)
SOX9SRY-box transcription factor 9. (509 aa)
FJX1Four-jointed box kinase 1. (437 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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