Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APP | BDNF | ENSCSAP00000005302 | ENSCSAP00000018826 | Amyloid beta precursor protein. | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | 0.630 |
| APP | CDK5 | ENSCSAP00000005302 | ENSCSAP00000002991 | Amyloid beta precursor protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.617 |
| APP | CTNNB1 | ENSCSAP00000005302 | ENSCSAP00000012943 | Amyloid beta precursor protein. | Catenin beta 1. | 0.449 |
| APP | EDN1 | ENSCSAP00000005302 | ENSCSAP00000003775 | Amyloid beta precursor protein. | Endothelin 1. | 0.433 |
| APP | NOTCH1 | ENSCSAP00000005302 | ENSCSAP00000011949 | Amyloid beta precursor protein. | Notch receptor 1. | 0.469 |
| APP | SHH | ENSCSAP00000005302 | ENSCSAP00000002769 | Amyloid beta precursor protein. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.413 |
| APP | TGFB1 | ENSCSAP00000005302 | ENSCSAP00000014519 | Amyloid beta precursor protein. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.495 |
| AREG | FGFR2 | ENSCSAP00000001060 | ENSCSAP00000001011 | Amphiregulin. | Fibroblast growth factor receptor. | 0.708 |
| AREG | SPRY2 | ENSCSAP00000001060 | ENSCSAP00000018156 | Amphiregulin. | Sprouty RTK signaling antagonist 2. | 0.555 |
| AURKA | HDAC6 | ENSCSAP00000011451 | ENSCSAP00000009365 | Aurora kinase A; Belongs to the protein kinase superfamily. | Histone deacetylase 6. | 0.572 |
| AURKA | KDM5B | ENSCSAP00000011451 | ENSCSAP00000010292 | Aurora kinase A; Belongs to the protein kinase superfamily. | Lysine demethylase 5B. | 0.463 |
| BDNF | APP | ENSCSAP00000018826 | ENSCSAP00000005302 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Amyloid beta precursor protein. | 0.630 |
| BDNF | CDK5 | ENSCSAP00000018826 | ENSCSAP00000002991 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.648 |
| BDNF | DCX | ENSCSAP00000018826 | ENSCSAP00000005043 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Doublecortin. | 0.630 |
| BDNF | ESR1 | ENSCSAP00000018826 | ENSCSAP00000010372 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Estrogen receptor 1. | 0.612 |
| BDNF | FGF1 | ENSCSAP00000018826 | ENSCSAP00000008567 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Multifunctional fusion protein; Plays an important role in the regulation of cell survival, cell division, angiogenesis, cell differentiation and cell migration. Functions as potent mitogen in vitro. Acts as a ligand for FGFR1 and integrins. Binds to FGFR1 in the presence of heparin leading to FGFR1 dimerization and activation via sequential autophosphorylation on tyrosine residues which act as docking sites for interacting proteins, leading to the activation of several signaling cascades. Binds to integrins. Its binding to integrins and subsequent ternary complex formation with integr [...] | 0.625 |
| BDNF | FGF10 | ENSCSAP00000018826 | ENSCSAP00000012799 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | 0.619 |
| BDNF | FGFR2 | ENSCSAP00000018826 | ENSCSAP00000001011 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Fibroblast growth factor receptor. | 0.700 |
| BDNF | LIMK1 | ENSCSAP00000018826 | ENSCSAP00000014207 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | LIM domain kinase 1. | 0.428 |
| BDNF | NRN1 | ENSCSAP00000018826 | ENSCSAP00000003615 | Brain-derived neurotrophic factor; During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. | Neuritin 1. | 0.465 |
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