STRINGSTRING
COL5A2 COL5A2 COL4A1 COL4A1 COL3A1 COL3A1 COL27A1 COL27A1 COL1A2 COL1A2 COL7A1 COL7A1 COL5A1 COL5A1 COL10A1 COL10A1 COL4A2 COL4A2 COL5A3 COL5A3 COL1A1 COL1A1 LUM LUM COL11A1 COL11A1 COL8A1 COL8A1 COL2A1 COL2A1 COL4A3 COL4A3 COL16A1 COL16A1 COL4A5 COL4A5 COL4A4 COL4A4 COL4A6 COL4A6 COL11A2 COL11A2 OTOL1 OTOL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
COL5A2Collagen type V alpha 2 chain. (1499 aa)
COL4A1Collagen type IV alpha 1 chain. (1669 aa)
COL3A1Collagen type III alpha 1 chain. (878 aa)
COL27A1Collagen type XXVII alpha 1 chain. (1860 aa)
COL1A2Collagen type I alpha 2 chain. (1274 aa)
COL7A1Collagen type VII alpha 1 chain. (2946 aa)
COL5A1Collagen type V alpha 1 chain. (1641 aa)
COL10A1Collagen type X alpha 1 chain. (680 aa)
COL4A2Collagen type IV alpha 2 chain. (1696 aa)
COL5A3Collagen type V alpha 3 chain. (1749 aa)
COL1A1Collagen type I alpha 1 chain. (1464 aa)
LUMLumican. (338 aa)
COL11A1Collagen type XI alpha 1 chain. (1806 aa)
COL8A1Collagen type VIII alpha 1 chain. (746 aa)
COL2A1Collagen type II alpha 1 chain. (1488 aa)
COL4A3Collagen type IV alpha 3 chain. (1670 aa)
COL16A1LAM_G_DOMAIN domain-containing protein. (868 aa)
COL4A5Collagen type IV alpha 5 chain. (882 aa)
COL4A4Collagen type IV alpha 4 chain. (1692 aa)
COL4A6Collagen IV NC1 domain-containing protein. (1379 aa)
COL11A2Collagen type XI alpha 2 chain. (1650 aa)
OTOL1Otolin 1. (470 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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