STRINGSTRING
PRKN PRKN HUWE1 HUWE1 HDAC6 HDAC6 TOMM7 TOMM7 PINK1 PINK1 MFN2 MFN2 CDC37 CDC37
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRKNParkin RBR E3 ubiquitin protein ligase. (288 aa)
HUWE1HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1. (4374 aa)
HDAC6Histone deacetylase 6. (1215 aa)
TOMM7Translocase of outer mitochondrial membrane 7. (55 aa)
PINK1PTEN induced kinase 1. (581 aa)
MFN2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
CDC37Cell division cycle 37. (378 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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