Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATF2 | ATF4 | ENSCSAP00000010644 | ENSCSAP00000002623 | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3'); Belongs to the bZIP family. | Activating transcription factor 4. | 0.939 |
| ATF2 | IRF3 | ENSCSAP00000010644 | ENSCSAP00000015566 | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3'); Belongs to the bZIP family. | Interferon regulatory factor 3. | 0.899 |
| ATF4 | ATF2 | ENSCSAP00000002623 | ENSCSAP00000010644 | Activating transcription factor 4. | Cyclic AMP-dependent transcription factor ATF-2; Transcriptional activator which regulates the transcription of various genes, including those involved in anti-apoptosis, cell growth, and DNA damage response. Dependent on its binding partner, binds to CRE (cAMP response element) consensus sequences (5'-TGACGTCA- 3') or to AP-1 (activator protein 1) consensus sequences (5'-TGACTCA- 3'); Belongs to the bZIP family. | 0.939 |
| BMI1 | EZH2 | ENSCSAP00000008651 | ENSCSAP00000003315 | RING-type domain-containing protein. | Enhancer of zeste 2 polycomb repressive complex 2 subunit. | 0.866 |
| BMI1 | HDAC2 | ENSCSAP00000008651 | ENSCSAP00000011772 | RING-type domain-containing protein. | Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.581 |
| BMI1 | PCGF1 | ENSCSAP00000008651 | ENSCSAP00000011736 | RING-type domain-containing protein. | Polycomb group ring finger 1. | 0.608 |
| BMI1 | PCGF2 | ENSCSAP00000008651 | ENSCSAP00000015401 | RING-type domain-containing protein. | Polycomb group ring finger 2. | 0.937 |
| BMI1 | SIRT1 | ENSCSAP00000008651 | ENSCSAP00000003766 | RING-type domain-containing protein. | Sirtuin 1. | 0.482 |
| BMI1 | SUZ12 | ENSCSAP00000008651 | ENSCSAP00000002874 | RING-type domain-containing protein. | SUZ12 polycomb repressive complex 2 subunit. | 0.834 |
| BMI1 | TP53 | ENSCSAP00000008651 | ENSCSAP00000007551 | RING-type domain-containing protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.560 |
| CHD7 | POLR2A | ENSCSAP00000010478 | ENSCSAP00000007724 | Chromodomain helicase DNA binding protein 7. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.451 |
| DDX5 | DHX9 | ENSCSAP00000000375 | ENSCSAP00000008730 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | DExH-box helicase 9. | 0.920 |
| DDX5 | ENSCSAP00000016053 | ENSCSAP00000000375 | ENSCSAP00000016053 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.466 |
| DDX5 | ENSCSAP00000017750 | ENSCSAP00000000375 | ENSCSAP00000017750 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.466 |
| DDX5 | HDAC1 | ENSCSAP00000000375 | ENSCSAP00000016960 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.466 |
| DDX5 | MYOD1 | ENSCSAP00000000375 | ENSCSAP00000001252 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | 0.435 |
| DDX5 | SMAD3 | ENSCSAP00000000375 | ENSCSAP00000009443 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Mothers against decapentaplegic homolog. | 0.596 |
| DDX5 | TP53 | ENSCSAP00000000375 | ENSCSAP00000007551 | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.786 |
| DHX9 | DDX5 | ENSCSAP00000008730 | ENSCSAP00000000375 | DExH-box helicase 9. | DEAD-box helicase 5; Belongs to the DEAD box helicase family. | 0.920 |
| DHX9 | HNRNPU | ENSCSAP00000008730 | ENSCSAP00000005471 | DExH-box helicase 9. | Heterogeneous nuclear ribonucleoprotein U. | 0.877 |
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