STRINGSTRING
TAF2 TAF2 POLR1B POLR1B POLR2D POLR2D GTF2F2 GTF2F2 TAF4B TAF4B TAF6 TAF6 RPRD1A RPRD1A LOC103249063 LOC103249063 RPRD2 RPRD2 ENSCSAP00000014101 ENSCSAP00000014101 POLR2J POLR2J POLI POLI LOC103246669 LOC103246669 ERCC2 ERCC2 CD3EAP CD3EAP POLR3B POLR3B GTF2H3 GTF2H3 POLR3GL POLR3GL POLR3C POLR3C POLR3E POLR3E GTF2E1 GTF2E1 RTF1 RTF1 TAF13 TAF13 WDR47 WDR47 RPAP2 RPAP2 AGO4 AGO4 TAF12 TAF12 TAF7 TAF7 GTF2A2 GTF2A2 ENSCSAP00000018400 ENSCSAP00000018400 ENSCSAP00000018504 ENSCSAP00000018504 ENSCSAP00000018506 ENSCSAP00000018506 LOC103247702 LOC103247702 C22orf23 C22orf23 POLA2 POLA2 POLR2F POLR2F POLR2G POLR2G POLR3H POLR3H TAF5 TAF5 POLR2B POLR2B PRIM1 PRIM1 GTF2H1 GTF2H1 POLR2C POLR2C RECQL5 RECQL5 PEPD PEPD CTR9 CTR9 POLR2I POLR2I PAF1 PAF1 ZNRD1 ZNRD1 GTF2H4 GTF2H4 SH3BP5L SH3BP5L ENSCSAP00000005289 ENSCSAP00000005289 POLR3A POLR3A GTF2F1 GTF2F1 TAF11 TAF11 TAF1L TAF1L TAF7L TAF7L CINP CINP POLR2L POLR2L TAF5L TAF5L TAF9B TAF9B POLR1E POLR1E TAF1 TAF1 PGC PGC TAF8 TAF8 LEO1 LEO1 POLR3F POLR3F POLR2A POLR2A GTF2A1 GTF2A1 TBP TBP POLR1C POLR1C POLR2M POLR2M POLR2K POLR2K DHX57 DHX57 POLR2E POLR2E SUPT3H SUPT3H POLRMT POLRMT GTF2H5 GTF2H5 POLR3K POLR3K CDC73 CDC73 TAF3 TAF3 PRIM2 PRIM2 PEX2 PEX2 TWISTNB TWISTNB GTF2A1L GTF2A1L POLR2H POLR2H RPRD1B RPRD1B MNAT1 MNAT1 POLA1 POLA1 TCEA1 TCEA1 CCNH CCNH WDR61 WDR61 TAF4 TAF4 GTF2H2 GTF2H2 CCDC125 CCDC125 CDK7 CDK7 POLR1A POLR1A LAP3 LAP3 POLR3D POLR3D
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF2TATA-box binding protein associated factor 2. (1251 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
TAF4BTATA-box binding protein associated factor 4b. (862 aa)
TAF6TATA-box binding protein associated factor 6. (678 aa)
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (312 aa)
LOC103249063Uncharacterized protein. (122 aa)
RPRD2Uncharacterized protein. (1171 aa)
ENSCSAP00000014101CID domain-containing protein. (239 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
POLIDNA polymerase iota. (672 aa)
LOC103246669Uncharacterized protein. (266 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (736 aa)
CD3EAPCD3e molecule associated protein. (513 aa)
POLR3BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (975 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
POLR3GLRNA polymerase III subunit G like. (210 aa)
POLR3CRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (534 aa)
POLR3ERNA polymerase III subunit E. (634 aa)
GTF2E1General transcription factor IIE subunit 1. (439 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (670 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
WDR47WD repeat domain 47. (919 aa)
RPAP2RNA polymerase II associated protein 2. (612 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (861 aa)
TAF12TATA-box binding protein associated factor 12. (161 aa)
TAF7TATA-box binding protein associated factor 7. (349 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
ENSCSAP00000018400Uncharacterized protein. (264 aa)
ENSCSAP00000018504TAFII28 domain-containing protein. (200 aa)
ENSCSAP00000018506TAFII28 domain-containing protein. (201 aa)
LOC103247702TAFII28 domain-containing protein. (211 aa)
C22orf23Chromosome 22 open reading frame 23. (217 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (598 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
POLR3HRNA polymerase III subunit H. (237 aa)
TAF5TATA-box binding protein associated factor 5. (588 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1167 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (420 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (991 aa)
PEPDPeptidase D. (506 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (531 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
SH3BP5LSH3 binding domain protein 5 like. (393 aa)
ENSCSAP00000005289DNA primase; Belongs to the eukaryotic-type primase small subunit family. (398 aa)
POLR3ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1390 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (438 aa)
TAF11TAFII28 domain-containing protein. (211 aa)
TAF1LTATA-box binding protein associated factor 1 like. (1476 aa)
TAF7LTATA-box binding protein associated factor 7 like. (461 aa)
CINPCyclin dependent kinase 2 interacting protein. (212 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
TAF5LTATA-box binding protein associated factor 5 like. (589 aa)
TAF9BTATA-box binding protein associated factor 9b. (254 aa)
POLR1ERNA polymerase I subunit E. (419 aa)
TAF1Transcription initiation factor TFIID subunit. (1894 aa)
PGCProgastricsin; Belongs to the peptidase A1 family. (388 aa)
TAF8TATA-box binding protein associated factor 8. (310 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
POLR3FDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1971 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
TBPTATA-box binding protein. (270 aa)
POLR1CRNA polymerase I and III subunit C. (346 aa)
POLR2MRNA polymerase II subunit M. (369 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
DHX57DExH-box helicase 57. (1387 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (231 aa)
POLRMTDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1229 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
POLR3KDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
CDC73Cell division cycle 73. (531 aa)
TAF3TATA-box binding protein associated factor 3. (931 aa)
PRIM2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (509 aa)
PEX2Peroxisomal biogenesis factor 2. (323 aa)
TWISTNBTWIST neighbor. (338 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (471 aa)
POLR2HRNA polymerase II subunit H. (187 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
POLA1DNA polymerase. (1465 aa)
TCEA1Transcription elongation factor A1. (301 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
WDR61WD repeat domain 61. (305 aa)
TAF4TATA-box binding protein associated factor 4. (842 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CCDC125Coiled-coil domain containing 125. (513 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
POLR1ARNA polymerase I subunit A. (1720 aa)
LAP3Leucine aminopeptidase 3. (519 aa)
POLR3DRNA polymerase III subunit D. (397 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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